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Self-supervised learning methods for medical images primarily rely on the imaging modality during pretraining. While such approaches deliver promising results, they do not leverage associated patient or scan information collected within…

Computer Vision and Pattern Recognition · Computer Science 2024-10-01 Saeed Shurrab , Alejandro Guerra-Manzanares , Farah E. Shamout

This paper systematically investigates the effectiveness of various augmentations for contrastive self-supervised learning of electrocardiogram (ECG) signals and identifies the best parameters. The baseline of our proposed self-supervised…

Signal Processing · Electrical Eng. & Systems 2022-06-16 Sahar Soltanieh , Ali Etemad , Javad Hashemi

In the past decade, with the development of big data technology, an increasing amount of patient information has been stored as electronic health records (EHRs). Leveraging these data, various doctor recommendation systems have been…

Information Retrieval · Computer Science 2022-07-14 Luning Bi , Yunlong Wang , Fan Zhang , Zhuqing Liu , Yong Cai , Emily Zhao

Network representation learning seeks to embed networks into a low-dimensional space while preserving the structural and semantic properties, thereby facilitating downstream tasks such as classification, trait prediction, edge…

Machine Learning · Statistics 2025-09-16 Zihan Dong , Xin Zhou , Ryumei Nakada , Lexin Li , Linjun Zhang

Modern electronic health records (EHRs) hold immense promise in tracking personalized patient health trajectories through sequential deep learning, owing to their extensive breadth, scale, and temporal granularity. Nonetheless, how to…

Electronic Health Records (EHR) offer rich real-world data for personalized medicine, providing insights into disease progression, treatment responses, and patient outcomes. However, their sparsity, heterogeneity, and high dimensionality…

Methodology · Statistics 2025-05-28 Linshanshan Wang , Mengyan Li , Zongqi Xia , Molei Liu , Tianxi Cai

Self-supervised contrastive learning is among the recent representation learning methods that have shown performance gains in several downstream tasks including semantic segmentation. This paper evaluates strong data augmentation, one of…

Image and Video Processing · Electrical Eng. & Systems 2025-12-11 Azeez Idris , Abdurahman Ali Mohammed , Samuel Fanijo

Recently, Graph Neural Networks (GNNs) achieve remarkable success in Recommendation. To reduce the influence of data sparsity, Graph Contrastive Learning (GCL) is adopted in GNN-based CF methods for enhancing performance. Most GCL methods…

Information Retrieval · Computer Science 2023-02-07 Junjie Huang , Qi Cao , Ruobing Xie , Shaoliang Zhang , Feng Xia , Huawei Shen , Xueqi Cheng

Clinical predictive models often rely on patients' electronic health records (EHR), but integrating medical knowledge to enhance predictions and decision-making is challenging. This is because personalized predictions require personalized…

Artificial Intelligence · Computer Science 2024-01-19 Pengcheng Jiang , Cao Xiao , Adam Cross , Jimeng Sun

The fundamental goal of self-supervised learning (SSL) is to produce useful representations of data without access to any labels for classifying the data. Modern methods in SSL, which form representations based on known or constructed…

Machine Learning · Computer Science 2022-09-30 Bobak T. Kiani , Randall Balestriero , Yubei Chen , Seth Lloyd , Yann LeCun

We present an end-to-end, interpretable, deep-learning architecture to learn a graph kernel that predicts the outcome of chronic disease drug prescription. This is achieved through a deep metric learning collaborative with a Support Vector…

Machine Learning · Computer Science 2020-08-06 Hao-Ren Yao , Der-Chen Chang , Ophir Frieder , Wendy Huang , I-Chia Liang , Chi-Feng Hung

Unsupervised heterogeneous graph representation learning (UHGRL) has gained increasing attention due to its significance in handling practical graphs without labels. However, heterophily has been largely ignored, despite its ubiquitous…

Machine Learning · Computer Science 2025-02-05 Zhixiang Shen , Zhao Kang

Machine learning has revolutionized the modeling of clinical timeseries data. Using machine learning, a Deep Neural Network (DNN) can be automatically trained to learn a complex mapping of its input features for a desired task. This is…

Machine Learning · Computer Science 2024-10-15 Ryan King , Shivesh Kodali , Conrad Krueger , Tianbao Yang , Bobak J. Mortazavi

Instance segmentation in electron microscopy (EM) volumes is tough due to complex shapes and sparse annotations. Self-supervised learning helps but still struggles with intricate visual patterns in EM. To address this, we propose a…

Computer Vision and Pattern Recognition · Computer Science 2023-09-06 Yinda Chen , Wei Huang , Xiaoyu Liu , Shiyu Deng , Qi Chen , Zhiwei Xiong

The wide adoption of Electronic Health Records (EHR) has resulted in large amounts of clinical data becoming available, which promises to support service delivery and advance clinical and informatics research. Deep learning techniques have…

Machine Learning · Computer Science 2022-02-14 Thanh Nguyen-Duc , Natasha Mulligan , Gurdeep S. Mannu , Joao H. Bettencourt-Silva

Heterogeneous graph neural networks can represent information of heterogeneous graphs with excellent ability. Recently, self-supervised learning manner is researched which learns the unique expression of a graph through a contrastive…

Machine Learning · Computer Science 2022-01-12 Minjae Park

Self-supervised instance discrimination is an effective contrastive pretext task to learn feature representations and address limited medical image annotations. The idea is to make features of transformed versions of the same images similar…

Computer Vision and Pattern Recognition · Computer Science 2022-11-17 Yejia Zhang , Xinrong Hu , Nishchal Sapkota , Yiyu Shi , Danny Z. Chen

Graph contrastive learning (GCL) aims to align the positive features while differentiating the negative features in the latent space by minimizing a pair-wise contrastive loss. As the embodiment of an outstanding discriminative unsupervised…

Machine Learning · Computer Science 2023-12-27 Jiangmeng Li , Yifan Jin , Hang Gao , Wenwen Qiang , Changwen Zheng , Fuchun Sun

The wide implementation of electronic health record (EHR) systems facilitates the collection of large-scale health data from real clinical settings. Despite the significant increase in adoption of EHR systems, this data remains largely…

Quantitative Methods · Quantitative Biology 2018-10-26 Jinghe Zhang , Kamran Kowsari , James H. Harrison , Jennifer M. Lobo , Laura E. Barnes

Electrocardiograms (ECGs) are widely used non-invasive measurements of cardiac activity and play a central role in clinical diagnosis. Recent multimodal approaches align ECG signals with clinical reports to incorporate diagnostic semantics,…