Related papers: Achievable Rates and Algorithms for Group Testing …
In nonadaptive group testing, the main research objective is to design an efficient algorithm to identify a set of up to $t$ positive elements among $n$ samples with as few tests as possible. Disjunct matrices and separable matrices are two…
This paper addresses the issue of design of low-rate sparse-graph codes with linear minimum distance in the blocklength. First, we define a necessary condition which needs to be satisfied when the linear minimum distance is to be ensured.…
It has been proven that, when normalized by $n$, the expected length of a longest common subsequence of $d$ random strings of length $n$ over an alphabet of size $\sigma$ converges to some constant that depends only on $d$ and $\sigma$.…
The fundamental result of Li, Long, and Srinivasan on approximations of set systems has become a key tool across several communities such as learning theory, algorithms, computational geometry, combinatorics and data analysis. The goal of…
Given $n$ items with at most $d$ of which being positive, instead of testing these items individually, the theory of combinatorial group testing aims to identify all positive items using as few tests as possible. This paper is devoted to a…
We establish a general formula for the maximum size of finite length block codes with minimum pairwise distance no less than $d$. The achievability argument involves an iterative construction of a set of radius-$d$ balls, each centered at a…
We consider nonadaptive group testing with Bernoulli tests, where each item is placed in each test independently with some fixed probability. We give a tight threshold on the maximum number of tests required to find the defective set under…
In this paper, we consider the problem of constructing optimal average-length binary codes under the constraint that each codeword must contain at most $D$ ones, where $D$ is a given input parameter. We provide an $O(n^2D)$-time complexity…
New non-asymptotic random coding theorems (with error probability $\epsilon$ and finite block length $n$) based on Gallager parity check ensemble and Shannon random code ensemble with a fixed codeword type are established for discrete input…
Minimal codes are linear codes where all non-zero codewords are minimal, i.e., whose support is not properly contained in the support of another codeword. The minimum possible length of such a $k$-dimensional linear code over $\mathbb{F}_q$…
The group testing problem consists of determining a small set of defective items from a larger set of items based on tests on groups of items, and is relevant in applications such as medical testing, communication protocols, pattern…
Generalized Davenport-Schinzel sequences are sequences that avoid a forbidden subsequence and have a sparsity requirement on their letters. Upper bounds on the lengths of generalized Davenport-Schinzel sequences have been applied to a…
We consider non-adaptive threshold group testing for identification of up to $d$ defective items in a set of $n$ items, where a test is positive if it contains at least $2 \leq u \leq d$ defective items, and negative otherwise. The…
The group testing problem consists of determining a small set of defective items from a larger set of items based on a number of possibly-noisy tests, and is relevant in applications such as medical testing, communication protocols, pattern…
We consider the problem of testing graph cluster structure: given access to a graph $G=(V, E)$, can we quickly determine whether the graph can be partitioned into a few clusters with good inner conductance, or is far from any such graph?…
We consider a version of the classical group testing problem motivated by PCR testing for COVID-19. In the so-called tropical group testing model, the outcome of a test is the lowest cycle threshold (Ct) level of the individuals pooled…
Disjunct matrices, also known as cover-free families and superimposed codes, are combinatorial arrays widely used in group testing. Among their variants, those that satisfy an additional combinatorial property called inclusiveness form a…
In the index coding problem, introduced by Birk and Kol (INFOCOM, 1998), the goal is to broadcast an n bit word to n receivers (one bit per receiver), where the receivers have side information represented by a graph G. The objective is to…
In the last decade remarkable progress has been made in development of suitable proof techniques for analysing randomised search heuristics. The theoretical investigation of these algorithms on classes of functions is essential to the…
We study practically efficient methods for performing combinatorial group testing. We present efficient non-adaptive and two-stage combinatorial group testing algorithms, which identify the at most d items out of a given set of n items that…