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We propose a novel graph visualization method leveraging random walk-based embeddings to replace costly graph-theoretical distance computations. Using word2vec-inspired embeddings, our approach captures both structural and semantic…

Computational Geometry · Computer Science 2025-09-23 Minglai Yang , Reyan Ahmed

The Graph Edit Distance (GED) is an important metric for measuring the similarity between two (labeled) graphs. It is defined as the minimum cost required to convert one graph into another through a series of (elementary) edit operations.…

Databases · Computer Science 2025-11-05 Andrea D'Ascenzo , Julian Meffert , Petra Mutzel , Fabrizio Rossi

We propose shifted inner-product similarity (SIPS), which is a novel yet very simple extension of the ordinary inner-product similarity (IPS) for neural-network based graph embedding (GE). In contrast to IPS, that is limited to…

Machine Learning · Statistics 2019-02-25 Akifumi Okuno , Geewook Kim , Hidetoshi Shimodaira

As graphical summaries for topological spaces and maps, Reeb graphs are common objects in the computer graphics or topological data analysis literature. Defining good metrics between these objects has become an important question for…

Computational Geometry · Computer Science 2017-03-09 Mathieu Carrière , Steve Oudot

Due to exponential growth of complex data, graph structure has become increasingly important to model various entities and their interactions, with many interesting applications including, bioinformatics, social network analysis, etc.…

Social and Information Networks · Computer Science 2018-01-23 Muhammad Abulaish , Jahiruddin

Graph embedding is a transformation of nodes of a graph into a set of vectors. A~good embedding should capture the graph topology, node-to-node relationship, and other relevant information about the graph, its subgraphs, and nodes. If these…

Social and Information Networks · Computer Science 2022-06-22 Arash Dehghan-Kooshkghazi , Bogumił Kamiński , Łukasz Kraiński , Paweł Prałat , François Théberge

Methods that learn representations of nodes in a graph play a critical role in network analysis since they enable many downstream learning tasks. We propose Graph2Gauss - an approach that can efficiently learn versatile node embeddings on…

Machine Learning · Statistics 2019-04-02 Aleksandar Bojchevski , Stephan Günnemann

In the field of node representation learning the task of interpreting latent dimensions has become a prominent, well-studied research topic. The contribution of this work focuses on appraising the interpretability of another…

Social and Information Networks · Computer Science 2025-01-22 Dougal Shakespeare , Camille Roth

Neural embeddings have been used with great success in Natural Language Processing (NLP). They provide compact representations that encapsulate word similarity and attain state-of-the-art performance in a range of linguistic tasks. The…

Machine Learning · Statistics 2018-09-20 Benjamin Paul Chamberlain , James Clough , Marc Peter Deisenroth

We study the problem of recovering a globally consistent Euclidean embedding of data, given only a local distance graph and propose a method that optimally represents these distances. The method operates solely on a neighborhood graph…

Machine Learning · Computer Science 2026-05-20 Dimitris Arabadjis

Computing efficiently a robust measure of similarity or dissimilarity between graphs is a major challenge in Pattern Recognition. The Graph Edit Distance (GED) is a flexible measure of dissimilarity between graphs which arises in…

Data Structures and Algorithms · Computer Science 2015-12-24 Sébastien Bougleux , Luc Brun , Vincenzo Carletti , Pasquale Foggia , Benoit Gaüzère , Mario Vento

Learning fair graph representations for downstream applications is becoming increasingly important, but existing work has mostly focused on improving fairness at the global level by either modifying the graph structure or objective function…

Social and Information Networks · Computer Science 2022-12-26 April Chen , Ryan Rossi , Nedim Lipka , Jane Hoffswell , Gromit Chan , Shunan Guo , Eunyee Koh , Sungchul Kim , Nesreen K. Ahmed

Modern datasets are characterized by a large number of features that may conceal complex dependency structures. To deal with this type of data, dimensionality reduction techniques are essential. Numerous dimensionality reduction methods…

Methodology · Statistics 2021-06-02 Francesco Denti , Diego Doimo , Alessandro Laio , Antonietta Mira

We consider the representation power of siamese-style similarity functions used in neural network-based graph embedding. The inner product similarity (IPS) with feature vectors computed via neural networks is commonly used for representing…

Machine Learning · Statistics 2018-07-13 Akifumi Okuno , Hidetoshi Shimodaira

Due to the over-smoothing issue, most existing graph neural networks can only capture limited dependencies with their inherently finite aggregation layers. To overcome this limitation, we propose a new kind of graph convolution, called…

Machine Learning · Computer Science 2022-06-30 Qi Chen , Yifei Wang , Yisen Wang , Jiansheng Yang , Zhouchen Lin

We propose a novel iterative method to adapt a a graph to d-dimensional image data. The method drives the nodes of the graph towards image features. The adaptation process naturally lends itself to a measure of feature saliency which can…

Computer Vision and Pattern Recognition · Computer Science 2019-09-06 Alberto Gomez , Veronika A. Zimmer , Bishesh Khanal , Nicolas Toussaint , Julia A. Schnabel

Shallow node embeddings like node2vec (N2V) can be used for nodes without features or to supplement existing features with structure-based information. Embedding methods like N2V are limited in their application on new nodes, which…

Machine Learning · Computer Science 2025-06-06 Nicolas Lell , Ansgar Scherp

Graph analytics can lead to better quantitative understanding and control of complex networks, but traditional methods suffer from high computational cost and excessive memory requirements associated with the high-dimensionality and…

Machine Learning · Computer Science 2020-12-16 Mengjia Xu

Network embedding aims to represent each node in a network as a low-dimensional feature vector that summarizes the given node's (extended) network neighborhood. The nodes' feature vectors can then be used in various downstream machine…

Social and Information Networks · Computer Science 2018-05-22 Shawn Gu , Tijana Milenkovic

Due to their capacity to encode rich structural information, labeled graphs are often used for modeling various kinds of objects such as images, molecules, and chemical compounds. If pattern recognition problems such as clustering and…

Data Structures and Algorithms · Computer Science 2019-08-02 David B. Blumenthal