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StateSpaceModels.jl is an open-source Julia package for modeling, forecasting and simulating time series in a state-space framework. The package represents a straightforward tool that can be useful for a wide range of applications that deal…

Computation · Statistics 2020-02-11 Raphael Saavedra , Guilherme Bodin , Mario Souto

The D4M tool is used by hundreds of researchers to perform complex analytics on unstructured data. Over the past few years, the D4M toolbox has evolved to support connectivity with a variety of database engines, graph analytics in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-02-13 Lauren Milechin , Alexander Chen , Vijay Gadepally , Dylan Hutchison , Siddharth Samsi , Jeremy Kepner

Estimating parameters of Partial Differential Equations (PDEs) from noisy and indirect measurements often requires solving ill-posed inverse problems. These so called parameter estimation or inverse medium problems arise in a variety of…

Mathematical Software · Computer Science 2016-12-15 Lars Ruthotto , Eran Treister , Eldad Haber

Satisfiability modulo theories (SMT) is a core tool in formal verification. While the SMT-LIB specification language can be used to interact with theorem proving software, a high-level interface allows for faster and easier specifications…

Logic in Computer Science · Computer Science 2024-12-05 Emiko Soroka , Mykel J. Kochenderfer , Sanjay Lall

Generalized sampling is a numerically stable framework for obtaining reconstructions of signals in different bases and frames from their samples. In this paper, we will introduce a carefully documented toolbox for performing generalized…

Mathematical Software · Computer Science 2016-11-24 Robert Dahl Jacobsen , Morten Nielsen , Morten Grud Rasmussen

Modular reasoning about class invariants is challenging in the presence of dependencies among collaborating objects that need to maintain global consistency. This paper presents semantic collaboration: a novel methodology to specify and…

Software Engineering · Computer Science 2014-05-08 Nadia Polikarpova , Julian Tschannen , Carlo A. Furia , Bertrand Meyer

Component-based software engineering aims to reduce software development effort by reusing established components as building blocks of complex systems. Defining components in general-purpose programming languages restricts their reuse to…

Software Engineering · Computer Science 2014-12-10 Jan Oliver Ringert , Bernhard Rumpe , Andreas Wortmann

Agent-based models capture heterogeneity among individuals in a population and are widely used in studies of multi-cellular systems, disease, epidemics and demography to name a few. However, existing frameworks consider discrete time-step…

Populations and Evolution · Quantitative Biology 2024-10-03 Paul Piho , Philipp Thomas

The evergrowing computational complexity of High Performance Computing applications is often met with an horizontal scalling of computing systems. Colaterally, each added node risks being a single point of failure to parallel programs,…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-04 Marcos Irigoyen , Carla Santana , Ramon C. F Araújo , Samuel Xavier-de-Souza

MIML library is a Java software tool to develop, test, and compare classification algorithms for multi-instance multi-label (MIML) learning. The library includes 43 algorithms and provides a specific format and facilities for data managing…

Machine Learning · Computer Science 2024-02-14 Álvaro Belmonte , Amelia Zafra , Eva Gibaja

This year marks the consolidation of Julia (https://julialang.org/), a programming language designed for scientific computing, as the first stable version (1.0) has been released, in August 2018. Among its main features, expressiveness and…

Instrumentation and Methods for Astrophysics · Physics 2018-12-05 Maurizio Tomasi , Mosè Giordano

Component-based software engineering (CBSE) decomposes complex systems into reusable components. Model-driven engineering (MDE) aims to abstract from complexities by lifting abstract models to primary development artifacts. Component and…

Software Engineering · Computer Science 2015-11-02 Lars Hermerschmidt , Katrin Hölldobler , Bernhard Rumpe , Andreas Wortmann

Modern modeling languages for general physical systems, such as Modelica, Amesim, or Simscape, rely on Differential Algebraic Equations (DAE), i.e., constraints of the form f(dot{x},x,u)=0. This drastically facilitates modeling from first…

Programming Languages · Computer Science 2021-01-20 Albert Benveniste , Benoît Caillaud , Mathias Malandain

Jjodel is a cloud-based reflective platform designed to address the challenges of Model-Driven Engineering (MDE), particularly the cognitive complexity and usability barriers often encountered in existing model-driven tools. This article…

Software Engineering · Computer Science 2025-02-14 Antonio Bucchiarone , Juri Di Rocco , Damiano Di Vincenzo , Alfonso Pierantonio

Driven by increasing compute requirements for deep learning models, compiler developers have been looking for ways to target specialised hardware and heterogeneous systems more efficiently. The MLIR project has the goal to offer…

Programming Languages · Computer Science 2025-03-10 Jules Merckx

We present the preliminary high-level design and features of DynamicPPL.jl, a modular library providing a lightning-fast infrastructure for probabilistic programming. Besides a computational performance that is often close to or better than…

Machine Learning · Computer Science 2020-02-10 Mohamed Tarek , Kai Xu , Martin Trapp , Hong Ge , Zoubin Ghahramani

Chemellia is an open-source framework for atomistic machine learning in the Julia programming language. The framework takes advantage of Julia's high speed as well as the ability to share and reuse code and interfaces through the paradigm…

Computational Engineering, Finance, and Science · Computer Science 2023-05-23 Anant Thazhemadam , Dhairya Gandhi , Venkatasubramanian Viswanathan , Rachel C. Kurchin

Implementing and executing numerical algorithms to solve fractional differential equations has been less straightforward than using their integer-order counterparts, posing challenges for practitioners who wish to incorporate fractional…

Numerical Analysis · Mathematics 2024-07-25 Moein Khalighi , Giulio Benedetti , Leo Lahti

The Java programming language contains many features that aid component-based software development (CBSD), such as interfaces, visibility levels, and strong support for encapsulation. However, component evolution often causes so-called…

Programming Languages · Computer Science 2011-06-10 Johan Nyström-Persson , Shinichi Honiden

Coding and computation remain major bottlenecks in Markov chain Monte Carlo (MCMC) workflows, especially as modern sampling algorithms have become increasingly complex and existing probabilistic programming systems remain limited in model…

Computation · Statistics 2026-05-19 Jungang Zou , Alex Ziyu Jiang , Qixuan Chen