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The core numbers of vertices in a graph are one of the most well-studied cohesive subgraph models because of the linear running time. In practice, many data graphs are dynamic graphs that are continuously changing by inserting or removing…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-14 Bin Guo , Emil Sekerinski

Projection-based iterative methods for solving large over-determined linear systems are well-known for their simplicity and computational efficiency. It is also known that the correct choice of a sketching procedure (i.e., preprocessing…

Numerical Analysis · Mathematics 2019-12-03 Elizaveta Rebrova , Deanna Needell

IC-planar graphs are those graphs that admit a drawing where no two crossed edges share an end-vertex and each edge is crossed at most once. They are a proper subfamily of the 1-planar graphs. Given an embedded IC-planar graph $G$ with $n$…

Computational Geometry · Computer Science 2016-07-19 Franz J. Brandenburg , Walter Didimo , William S. Evans , Philipp Kindermann , Giuseppe Liotta , Fabrizio Montecchiani

As an important metric for mesh quality evaluation, the isotropy property holds significant value for applications such as texture UV-mapping, physical simulation, and discrete geometric analysis. Classical isotropy remeshing methods adjust…

Computational Geometry · Computer Science 2025-08-05 Hanbing Zheng , Chenlei Lv

This paper leverages the framework of algorithms-with-predictions to design data structures for two fundamental dynamic graph problems: incremental topological ordering and cycle detection. In these problems, the input is a directed graph…

Data Structures and Algorithms · Computer Science 2024-02-20 Samuel McCauley , Benjamin Moseley , Aidin Niaparast , Shikha Singh

Force-directed approach is one of the most widely used methods in graph drawing research. There are two main problems with the traditional force-directed algorithms. First, there is no mature theory to ensure the convergence of iteration…

Computational Geometry · Computer Science 2018-03-12 Yong-Xian Wang , Zheng-Hua Wang

Iterative ptychographic reconstruction algorithms are widely used for coherent diffractive imaging but can exhibit slow convergence under realistic experimental conditions. We propose a machine learning-augmented approach that accelerates…

Designing molecular structures with desired chemical properties is an essential task in drug discovery and material design. However, finding molecules with the optimized desired properties is still a challenging task due to combinatorial…

Biomolecules · Quantitative Biology 2023-02-02 Masatsugu Yamada , Mahito Sugiyama

Euler diagrams are an intuitive and popular method to visualize set-based data. In a Euler diagram, each set is represented as a closed curve, and set intersections are shown by curve overlaps. However, Euler diagrams are not visually…

Computational Geometry · Computer Science 2023-11-28 Xinyuan Yan , Peter Rodgers , Peter Rottmann , Daniel Archambault , Jan-Henrik Haunert , Bei Wang

Recently there has been a surge of interest in designing graph embedding methods. Few, if any, can scale to a large-sized graph with millions of nodes due to both computational complexity and memory requirements. In this paper, we relax…

Artificial Intelligence · Computer Science 2020-08-17 Jiongqian Liang , Saket Gurukar , Srinivasan Parthasarathy

Bach et al. [1] recently presented an algorithm for constructing confluent drawings, by leveraging power graph decomposition to generate an auxiliary routing graph. We identify two issues with their method which we call the node split and…

Computational Geometry · Computer Science 2019-09-04 Jonathan X. Zheng , Samraat Pawar , Dan F. M. Goodman

Stress, edge crossings, and crossing angles play an important role in the quality and readability of graph drawings. Most standard graph drawing algorithms optimize one of these criteria which may lead to layouts that are deficient in other…

Computational Geometry · Computer Science 2019-08-26 Sabin Devkota , Reyan Ahmed , Felice De Luca , Katherine E. Isaacs , Stephen Kobourov

Metric learning has the aim to improve classification accuracy by learning a distance measure which brings data points from the same class closer together and pushes data points from different classes further apart. Recent research has…

Machine Learning · Computer Science 2018-05-21 Benjamin Paaßen

Graph embedding provides an efficient solution for graph analysis by converting the graph into a low-dimensional space which preserves the structure information. In contrast to the graph structure data, the i.i.d. node embedding can be…

Machine Learning · Computer Science 2017-05-16 Hongyun Cai , Vincent W. Zheng , Kevin Chen-Chuan Chang

This work considers clustering nodes of a largely incomplete graph. Under the problem setting, only a small amount of queries about the edges can be made, but the entire graph is not observable. This problem finds applications in…

Machine Learning · Computer Science 2021-10-04 Shahana Ibrahim , Xiao Fu

Graph Sampling provides an efficient yet inexpensive solution for analyzing large graphs. While extracting small representative subgraphs from large graphs, the challenge is to capture the properties of the original graph. Several sampling…

Data Structures and Algorithms · Computer Science 2019-10-21 Muhammad Irfan Yousuf , Raheel Anwar

Given an edge-weighted graph $G$ on $n$ nodes, the NP-hard Max-Cut problem asks for a node bipartition such that the sum of edge weights joining the different partitions is maximized. We propose a fixed-parameter tractable algorithm…

Data Structures and Algorithms · Computer Science 2020-07-23 Markus Chimani , Christine Dahn , Martina Juhnke-Kubitzke , Nils M. Kriege , Petra Mutzel , Alexander Nover

In a planar confluent orthogonal drawing (PCOD) of a directed graph (digraph) vertices are drawn as points in the plane and edges as orthogonal polylines starting with a vertical segment and ending with a horizontal segment. Edges may…

Computational Geometry · Computer Science 2022-09-01 Sabine Cornelsen , Gregor Diatzko

Graph-cuts are widely used in computer vision. In order to speed up the optimization process and improve the scalability for large graphs, Strandmark and Kahl introduced a splitting method to split a graph into multiple subgraphs for…

Data Structures and Algorithms · Computer Science 2016-11-03 Miao Yu , Shuhan Shen , Zhanyi Hu

In the Partially Embedded Planarity problem, we are given a graph $G$ together with a topological drawing of a subgraph $H$ of $G$. The task is to decide whether the drawing can be extended to a drawing of the whole graph such that no two…

Computational Geometry · Computer Science 2024-10-18 Simon D. Fink , Ignaz Rutter , Sandhya T. P
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