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Over the past decade, exoplanet atmospheric characterization has became what some might call the cosmology of astronomy. In an attempt to extract and understand the weak planetary signals (a few percent down to a few tens of ppm times that…

Earth and Planetary Astrophysics · Physics 2024-04-01 Patricio E. Cubillos

The advent of increasingly large and complex datasets has fundamentally altered the way that scientists conduct astronomy research. The need to work closely to the data has motivated the creation of online science platforms, which include a…

Instrumentation and Methods for Astrophysics · Physics 2021-04-15 Stéphanie Juneau , Knut A. G. Olsen , Robert Nikutta , Alice Jacques , Stephen Bailey

Contemporary debates on "open science" mostly focus on the pub- lic accessibility of the products of scientific and academic work. In contrast, this paper presents arguments for "opening" the ongoing work of science. That is, this paper is…

Physics Education · Physics 2017-02-17 Pratim Sengupta , Marie-Claire Shanahan

Python has become the prime language for application development in the Data Science and Machine Learning domains. However, data scientists are not necessarily experienced programmers. While Python lets them quickly implement their…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-08-24 Oscar Castro , Pierrick Bruneau , Jean-Sébastien Sottet , Dario Torregrossa

Scipp is heavily inspired by the Python library xarray. It enriches raw NumPy-like multi-dimensional arrays of data by adding named dimensions and associated coordinates. Multiple arrays are combined into datasets. On top of this, scipp…

Mathematical Software · Computer Science 2020-10-02 Simon Heybrock , Owen Arnold , Igor Gudich , Daniel Nixon , Neil Vaytet

The Italian AGILE space mission, with its Gamma-Ray Imaging Detector (GRID) instrument sensitive in the 30 MeV-50 GeV gamma-ray energy band, has been operating since 2007. Agilepy is an open-source Python package to analyse AGILE/GRID data.…

Instrumentation and Methods for Astrophysics · Physics 2023-02-09 A. Bulgarelli , L. Baroncelli , A. Addis , N. Parmiggiani , A. Aboudan , A. Di Piano , V. Fioretti , M. Tavani , C. Pittori , F. Lucarelli , F. Verrecchia

BayesPy is an open-source Python software package for performing variational Bayesian inference. It is based on the variational message passing framework and supports conjugate exponential family models. By removing the tedious task of…

Machine Learning · Statistics 2015-06-08 Jaakko Luttinen

The national space programs have an historic opportunity to help solve the global-scale economic and environmental problems of Earth while becoming more effective at science through the use of space resources. Space programs will be more…

Instrumentation and Methods for Astrophysics · Physics 2016-11-24 Philip Metzger

FluidDyn is a project to foster open-science and open-source in the fluid dynamics community. It is thought of as a research project to channel open-source dynamics, methods and tools to do science. We propose a set of Python packages…

Other Computer Science · Computer Science 2019-04-10 Pierre Augier , Ashwin Vishnu Mohanan , Cyrille Bonamy

Inference on time series data is a common requirement in many scientific disciplines and internet of things (IoT) applications, yet there are few resources available to domain scientists to easily, robustly, and repeatably build such…

Mathematical Software · Computer Science 2016-09-16 Brett Naul , Stéfan van der Walt , Arien Crellin-Quick , Joshua S. Bloom , Fernando Pérez

We review various changes made in recent years to the software development process of the LAMMPS simulation software package and the software itself. We discuss how those changes have impacted the effort and workflow required to develop and…

Software Engineering · Computer Science 2025-05-13 Axel Kohlmeyer , Richard Berger

Julia is a mature general-purpose programming language, with a large ecosystem of libraries and more than 12000 third-party packages, which specifically targets scientific computing. As a language, Julia is as dynamic, interactive, and…

In this paper, we present MusPy, an open source Python library for symbolic music generation. MusPy provides easy-to-use tools for essential components in a music generation system, including dataset management, data I/O, data preprocessing…

Sound · Computer Science 2020-08-06 Hao-Wen Dong , Ke Chen , Julian McAuley , Taylor Berg-Kirkpatrick

This dissertation focuses on the development process of scientific software. It presents a methodology that has emerged over time during development of Monte Carlo tools for high energy physics experiments. A short description of the…

Software Engineering · Computer Science 2022-03-23 T. Przedzinski

As scientific work becomes more computational and data intensive, research processes and results become more difficult to interpret and reproduce. In this poster, we show how the Jupyter notebook, a tool originally designed as a free…

Digital Libraries · Computer Science 2018-04-17 Bernadette M. Boscoe , Irene V. Pasquetto , Milena S. Golshan , Christine L. Borgman

A recent study showed that more than 70% of researchers fail to reproduce their peers's experiments and more than half fail to reproduce their own experiments. Obviously, from a perspective of scientific quality this is a more than…

Human-Computer Interaction · Computer Science 2021-03-18 Andrew Tristan , Vinicius Woloszyn , Ben Kaden

Bayesian Networks (BNs) are used in various fields for modeling, prediction, and decision making. pgmpy is a python package that provides a collection of algorithms and tools to work with BNs and related models. It implements algorithms for…

Machine Learning · Computer Science 2023-04-19 Ankur Ankan , Johannes Textor

Fostered by upcoming data from new generation observational campaigns, we are about to enter a new era for the study of how galaxies form and evolve. The unprecedented quantity of data that will be collected, from distances only marginally…

We present Spacerini, a tool that integrates the Pyserini toolkit for reproducible information retrieval research with Hugging Face to enable the seamless construction and deployment of interactive search engines. Spacerini makes…

Information Retrieval · Computer Science 2024-03-26 Christopher Akiki , Odunayo Ogundepo , Aleksandra Piktus , Xinyu Zhang , Akintunde Oladipo , Jimmy Lin , Martin Potthast

This white paper briefly summarized key conclusions of the recent US Community Study on the Future of Particle Physics (Snowmass 2021) workshop on Software and Computing for Small High Energy Physics Experiments.

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