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Species interactions (ranging from direct predator prey relationships to indirect effects mediated by the environment) are central to ecosystem balance and biodiversity. While empirical methods for measuring these interactions exist, their…

Populations and Evolution · Quantitative Biology 2025-08-27 Javier Aguilar , Samir Suweis , Amos Maritan , Sandro Azaele

Similarity of competitors has been proposed to facilitate coexistence of species because it slows down competitive exclusion, thus making it easier for equalizing mechanisms to maintain diverse communities. On the other hand, chaos can…

Populations and Evolution · Quantitative Biology 2019-02-27 Pablo Rodríguez-Sánchez , Egbert H. van Nes , Marten Scheffer

We study the evolution of networks through `triplets' - three-node graphlets. We develop a method to compute a transition matrix to describe the evolution of triplets in temporal networks. To identify the importance of higher-order…

Physics and Society · Physics 2021-08-02 Qing Yao , Bingsheng Chen , Kim Christensen , Tim S. Evans

We analyse the stability of linear dynamical systems defined on sparse, random graphs with predator-prey, competitive, and mutualistic interactions. These systems are aimed at modelling the stability of fixed points in large systems defined…

Statistical Mechanics · Physics 2025-01-30 Andrea Marcello Mambuca , Chiara Cammarota , Izaak Neri

Reaction-diffusion systems may lead to the formation of steady state heterogeneous spatial patterns, known as Turing patterns. Their mathematical formulation is important for the study of pattern formation in general and play central roles…

Pattern Formation and Solitons · Physics 2015-06-05 Lucas D. Fernandes , Marcus A. M. Aguiar

Cooperation is a difficult proposition in the face of Darwinian selection. Those that defect have an evolutionary advantage over cooperators who should therefore die out. However, spatial structure enables cooperators to survive through the…

Physics and Society · Physics 2018-02-02 Attila Szolnoki , Matjaz Perc

The self-protection of alliances against external invaders is a key concept behind the maintenance of biodiversity in the face of natural selection. But since these alliances, which can be formed by different numbers of competitors, can…

Populations and Evolution · Quantitative Biology 2022-12-07 Attila Szolnoki , Matjaz Perc

We show how highly-diverse ecological communities may display persistent abundance fluctuations, when interacting through resource competition and subjected to migration from a species pool. This turns out to be closely related to the ratio…

Statistical Mechanics · Physics 2020-02-12 Itay Dalmedigos , Guy Bunin

Formation and competition of associations are studied in a six-species ecological model where each species has two predators and two prey. Each site of a square lattice is occupied by an individual belonging to one of the six species. The…

Populations and Evolution · Quantitative Biology 2008-08-26 G. Szabo , A. Szolnoki , I. Borsos

In many natural situations one observes a local system with many competing species which is coupled by weak immigration to a regional species pool. The dynamics of such a system is dominated by its stable and uninvadable (SU) states. When…

Populations and Evolution · Quantitative Biology 2017-07-26 Yael Fried , Nadav M. Shnerb , David A. Kessler

Natural birth and death are fundamental mechanisms of population dynamics in ecosystems and have played pivotal roles in shaping population dynamics. Nevertheless, in studies of cyclic competition systems governed by the rock-paper-scissors…

Populations and Evolution · Quantitative Biology 2026-02-19 Yikang Lu , Wenhao She , Xiaofang Duan , Junpyo Park

Predicting species persistence within ecological communities is a fundamental challenge for both empirical and theoretical ecology. Existing methods span from mechanistic models, whose parameters are difficult to estimate from data, to…

Populations and Evolution · Quantitative Biology 2026-04-30 Davide Bernardi , Giorgio Nicoletti , Prajwal Padmanabha , Samir Suweis , Sandro Azaele , Simon A. Levin , Andrea Rinaldo , Amos Maritan

Dynamic interspecific interactions are thought to contribute to fundamental structures of ecological communities. Using the Yodzis framework of dominance control versus founder control versus niche control, the importance of intransitive…

Populations and Evolution · Quantitative Biology 2015-02-19 John Vandermeer

Mutualistic interactions, where individuals from different species can benefit from each other, are widespread across ecosystems. This study develops a general deterministic model of mutualism involving two populations, assuming that…

Populations and Evolution · Quantitative Biology 2026-02-26 Chloë Mian , Sylvain Billiard , Violaine Llaurens , Charline Smadi

An ecosystem is a nonlinear dynamical system, its orbits giving rise to the observed complexity in the system. The diverse components of the ecosystem interact in discrete time to give rise to emergent features that determine the trajectory…

Dynamical Systems · Mathematics 2015-07-29 Sudeepto Bhattacharya , L. M. Saha

Ecosystems, which are intricate amalgams of biological communities and their surrounding environments, continually evolve under the influence of their myriad interactions. The world is currently facing intensifying environmental…

Biological Physics · Physics 2023-11-23 Ikumi Kobayashi

Adaptive network is a powerful presentation to describe different real-world phenomena. However, current models often neglect higher-order interactions (beyond pairwise interactions) and diverse adaptation types (cooperative and…

Adaptation and Self-Organizing Systems · Physics 2025-01-24 S. Nirmala Jenifer , Dibakar Ghosh , Paulsamy Muruganandam

Relations among species in ecosystems can be represented by complex networks where both negative (competition) and positive (mutualism) interactions are concurrently present. Recently, it has been shown that many ecosystems can be cast into…

Physics and Society · Physics 2017-03-20 Carlos Gracia-Lázaro , Laura Hernández , Javier Borge-Holthoefer , Yamir Moreno

A system made up of N interacting species is considered. Self-reaction terms are assumed of the logistic type. Pairwise interactions take place among species according to different modalities, thus yielding a complex asymmetric disordered…

Statistical Mechanics · Physics 2018-11-14 Giulia Cencetti , Franco Bagnoli , Giorgio Battistelli , Luigi Chisci , Duccio Fanelli

Understanding how cooperative behaviours can emerge from competitive interactions is an open problem in biology and social sciences. While interactions are usually modelled as pairwise networks, the units of many real-world systems can also…

Physics and Society · Physics 2024-05-21 Andrea Civilini , Onkar Sadekar , Federico Battiston , Jesús Gómez-Gardeñes , Vito Latora
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