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We study clinical Named Entity Recognition (NER) on the CADEC corpus and compare three families of approaches: (i) BERT-style encoders (BERT Base, BioClinicalBERT, RoBERTa-large), (ii) GPT-4o used with few-shot in-context learning (ICL)…

Computation and Language · Computer Science 2025-10-28 Andrei Baroian

Consistency training is a popular method to improve deep learning models in computer vision and natural language processing. Graph neural networks (GNNs) have achieved remarkable performance in a variety of network science learning tasks,…

Machine Learning · Computer Science 2021-10-14 Cole Hawkins , Vassilis N. Ioannidis , Soji Adeshina , George Karypis

The reliability of Healthcare Information Systems (HIS) is frequently compromised by human-induced data entry errors, which existing statistical anomaly detection methods fail to distinguish from legitimate clinical extremes. This paper…

Machine Learning · Computer Science 2026-05-18 Abolfazl Zarghani , Amir Malekesfandiari

Short Text Classification (STC) is crucial for processing and understanding the brief but substantial content prevalent on contemporary digital platforms. The STC encounters difficulties in grasping the semantic and syntactic intricacies,…

Computation and Language · Computer Science 2025-01-22 Hui Wu , Yuanben Zhang , Zhonghe Han , Yingyan Hou , Lei Wang , Siye Liu , Qihang Gong , Yunping Ge

Recently, Graph Convolutional Networks (GCNs) have proven to be a powerful machine learning tool for Computer-Aided Diagnosis (CADx) and disease prediction. A key component in these models is to build a population graph, where the graph…

Machine Learning · Computer Science 2022-05-16 Luca Cosmo , Anees Kazi , Seyed-Ahmad Ahmadi , Nassir Navab , Michael Bronstein

Common factors and microcounseling skills are critical to the effectiveness of psychotherapy. Understanding and measuring these elements provides valuable insights into therapeutic processes and outcomes. However, automatic identification…

Computation and Language · Computer Science 2025-07-01 Fabian Schmidt , Karin Hammerfald , Henrik Haaland Jahren , Vladimir Vlassov

Knowledge graphs are freely aggregated, published, and edited in the Web of data, and thus may overlap. Hence, a key task resides in aligning (or matching) their content. This task encompasses the identification, within an aggregated…

Machine Learning · Computer Science 2021-10-22 Pierre Monnin , Chedy Raïssi , Amedeo Napoli , Adrien Coulet

Semantic networks, such as the knowledge graph, can represent the knowledge leveraging the graph structure. Although the knowledge graph shows promising values in natural language processing, it suffers from incompleteness. This paper…

Computation and Language · Computer Science 2022-04-29 Da Li , Sen Yang , Kele Xu , Ming Yi , Yukai He , Huaimin Wang

Pretrained language models such as BERT, GPT have shown great effectiveness in language understanding. The auxiliary predictive tasks in existing pretraining approaches are mostly defined on tokens, thus may not be able to capture…

Computation and Language · Computer Science 2020-06-19 Hongchao Fang , Sicheng Wang , Meng Zhou , Jiayuan Ding , Pengtao Xie

The goal of text simplification (TS) is to transform difficult text into a version that is easier to understand and more broadly accessible to a wide variety of readers. In some domains, such as healthcare, fully automated approaches cannot…

Computation and Language · Computer Science 2020-10-22 Hoang Van , David Kauchak , Gondy Leroy

With the rapid advancement of Spatial Resolved Transcriptomics (SRT) technology, it is now possible to comprehensively measure gene transcription while preserving the spatial context of tissues. Spatial domain identification and gene…

Genomics · Quantitative Biology 2024-08-14 Donghai Fang , Fangfang Zhu , Dongting Xie , Wenwen Min

Existing techniques to adapt semantic segmentation networks across the source and target domains within deep convolutional neural networks (CNNs) deal with all the samples from the two domains in a global or category-aware manner. They do…

Computer Vision and Pattern Recognition · Computer Science 2020-12-18 Minsu Kim , Sunghun Joung , Seungryong Kim , JungIn Park , Ig-Jae Kim , Kwanghoon Sohn

Semantic role labeling (SRL) is the task of identifying the predicate-argument structure of a sentence. It is typically regarded as an important step in the standard NLP pipeline. As the semantic representations are closely related to…

Computation and Language · Computer Science 2017-08-01 Diego Marcheggiani , Ivan Titov

During the last half decade, convolutional neural networks (CNNs) have triumphed over semantic segmentation, which is one of the core tasks in many applications such as autonomous driving. However, to train CNNs requires a considerable…

Computer Vision and Pattern Recognition · Computer Science 2018-11-15 Yang Zhang , Philip David , Boqing Gong

Recent works show that mean-teaching is an effective framework for unsupervised domain adaptive person re-identification. However, existing methods perform contrastive learning on selected samples between teacher and student networks, which…

Computer Vision and Pattern Recognition · Computer Science 2021-06-01 Xiaobin Liu , Shiliang Zhang

Learning domain-invariant visual representations is important to train a model that can generalize well to unseen target task domains. Recent works demonstrate that text descriptions contain high-level class-discriminative information and…

Computer Vision and Pattern Recognition · Computer Science 2024-12-25 Nokyung Park , Daewon Chae , Jeongyong Shim , Sangpil Kim , Eun-Sol Kim , Jinkyu Kim

In medical image segmentation tasks, the domain gap caused by the difference in data collection between training and testing data seriously hinders the deployment of pre-trained models in clinical practice. Continual Test-Time Adaptation…

Computer Vision and Pattern Recognition · Computer Science 2026-03-13 Xiaogang Du , Jiawei Zhang , Tongfei Liu , Tao Lei , Yingbo Wang

Off-the-shelf biomedical embeddings obtained from the recently released various pre-trained language models (such as BERT, XLNET) have demonstrated state-of-the-art results (in terms of accuracy) for the various natural language…

Computation and Language · Computer Science 2020-12-22 Ishani Mondal

Recent advances in natural language processing (NLP) can be largely attributed to the advent of pre-trained language models such as BERT and RoBERTa. While these models demonstrate remarkable performance on general datasets, they can…

Citation graphs are fundamental tools for modeling scientific structure, but are often fragmented due to missing citations of scientifically connected articles. To address this issue, we propose a computationally efficient hybrid framework…

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