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This paper presents a novel centroid-based heuristic algorithm, termed Kempe Swap K-Means, for constrained clustering under rigid must-link (ML) and cannot-link (CL) constraints. The algorithm employs a dual-phase iterative process: an…

Machine Learning · Computer Science 2026-03-31 Yuxuan Ren , Shijie Deng

Developing efficient path integral (PI) methods for atomistic simulations of vibrational spectra in heterogeneous condensed phases and interfaces has long been a challenging task. Here, we present the h-CMD method, short for hybrid centroid…

Chemical Physics · Physics 2025-05-08 Dil K. Limbu , Nathan London , Md Omar Faruque , Mohammad R. Momeni

Coupled cluster calculations are traditionally performed over Hartree-Fock reference orbitals (HF-CC methodology). However, it has been repeatedly argued in the literature that the use of a Kohn-Sham reference (KS-CC methodology) might…

Chemical Physics · Physics 2025-03-10 Zsolt Benedek , Paula Tímár , Tibor Szilvási , Gergely Barcza

K-means is a popular clustering method used in data mining area. To work with large datasets, researchers propose PKMeans, which is a parallel k-means on MapReduce. However, the existing k-means parallelization methods including PKMeans…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-08-30 Shikai Jin , Yuxuan Cui , Chunli Yu

In this paper, the decades-old clustering method k-means is revisited. The original distortion minimization model of k-means is addressed by a pure stochastic minimization procedure. In each step of the iteration, one sample is tentatively…

Machine Learning · Computer Science 2020-05-20 Wan-Lei Zhao , Run-Qing Chen , Hui Ye , Chong-Wah Ngo

In this paper we target the class of modal clustering methods where clusters are defined in terms of the local modes of the probability density function which generates the data. The most well-known modal clustering method is the k-means…

Machine Learning · Computer Science 2022-03-04 Gaël Beck , Tarn Duong , Mustapha Lebbah , Hanane Azzag , Christophe Cérin

We propose an empirical method for identifying low damped modes and corresponding mode shapes using frequency measurements from a Wide Area Monitoring System. The method consists of two main steps: Firstly, Complex Principal Component…

Signal Processing · Electrical Eng. & Systems 2021-02-02 Hallvar Haugdal , Kjetil Uhlen

Clustering data is a popular feature in the field of unsupervised machine learning. Most algorithms aim to find the best method to extract consistent clusters of data, but very few of them intend to cluster data that share the same…

Machine Learning · Computer Science 2022-06-22 Jean-Sébastien Dessureault , Daniel Massicotte

Coupled cluster theory with a Kohn-Sham reference (KS-CC) can dramatically outperform its Hartree-Fock counterpart for strongly correlated systems, but the origin of these improvements has remained unclear. Here we demonstrate that these…

This paper presents an architecture-friendly k-means clustering algorithm called SIVF for a large-scale and high-dimensional sparse data set. Algorithm efficiency on time is often measured by the number of costly operations such as…

Machine Learning · Statistics 2021-03-31 Kazuo Aoyama , Kazumi Saito

The k-means algorithm is one of the most common clustering algorithms and widely used in data mining and pattern recognition. The increasing computational requirement of big data applications makes hardware acceleration for the k-means…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-23 Zhehao Li , Jifang Jin , Lingli Wang

A novel nonparametric clustering algorithm is proposed using the interpoint distances between the members of the data to reveal the inherent clustering structure existing in the given set of data, where we apply the classical nonparametric…

Methodology · Statistics 2024-09-02 Soumita Modak

Deep learning self-supervised algorithms that can segment an image in a fixed number of hard labels such as the k-means algorithm and relying only on deep learning techniques are still lacking. Here, we introduce the k-textures algorithm…

Computer Vision and Pattern Recognition · Computer Science 2022-05-31 Fabien H. Wagner , Ricardo Dalagnol , Alber H. Sánchez , Mayumi C. M. Hirye , Samuel Favrichon , Jake H. Lee , Steffen Mauceri , Yan Yang , Sassan Saatchi

Centroid-based clustering algorithms, such as hard K-means (HKM) and fuzzy K-means (FKM), have suffered from learning bias towards large clusters. Their centroids tend to be crowded in large clusters, compromising performance when the true…

Machine Learning · Computer Science 2024-06-07 Yudong He

Kernel $k$-means clustering can correctly identify and extract a far more varied collection of cluster structures than the linear $k$-means clustering algorithm. However, kernel $k$-means clustering is computationally expensive when the…

Machine Learning · Computer Science 2019-02-12 Shusen Wang , Alex Gittens , Michael W. Mahoney

The $k$-Means clustering problem on $n$ points is NP-Hard for any dimension $d\ge 2$, however, for the 1D case there exists exact polynomial time algorithms. Previous literature reported an $O(kn^2)$ time dynamic programming algorithm that…

Data Structures and Algorithms · Computer Science 2018-04-26 Allan Grønlund , Kasper Green Larsen , Alexander Mathiasen , Jesper Sindahl Nielsen , Stefan Schneider , Mingzhou Song

\textit{Clustering problems} often arise in the fields like data mining, machine learning etc. to group a collection of objects into similar groups with respect to a similarity (or dissimilarity) measure. Among the clustering problems,…

Computational Geometry · Computer Science 2015-12-10 Sayan Bandyapadhyay , Kasturi Varadarajan

Unsupervised machine learning methods are used to identify structural changes using the melting point transition in classical molecular dynamics simulations as an example application of the approach. Dimensionality reduction and clustering…

Computational Physics · Physics 2018-12-06 Nicholas Walker , Ka-Ming Tam , Brian Novak , M. Jarrell

Clustering, a fundamental activity in unsupervised learning, is notoriously difficult when the feature space is high-dimensional. Fortunately, in many realistic scenarios, only a handful of features are relevant in distinguishing clusters.…

Machine Learning · Statistics 2020-10-23 Zhiyue Zhang , Kenneth Lange , Jason Xu

K-Medoids(KM) is a standard clustering method, used extensively on semi-metric data.Error analyses of KM have traditionally used an in-sample notion of error,which can be far from the true error and suffer from generalization gap. We…

Machine Learning · Computer Science 2019-10-31 Aravindakshan Babu , Saurabh Agarwal , Sudarshan Babu , Hariharan Chandrasekaran