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Variational inference is an increasingly popular method in statistics and machine learning for approximating probability distributions. We developed LINFA (Library for Inference with Normalizing Flow and Annealing), a Python library for…

Machine Learning · Computer Science 2023-07-17 Yu Wang , Emma R. Cobian , Jubilee Lee , Fang Liu , Jonathan D. Hauenstein , Daniele E. Schiavazzi

The notion of complex systems is common to many domains, from Biology to Economy, Computer Science, Physics, etc. Often, these systems are made of sets of entities moving in an evolving environment. One of their major characteristics is the…

Mathematical Software · Computer Science 2008-12-18 Yoann Pigné , Antoine Dutot , Frédéric Guinand , Damien Olivier

Graph Representation Learning (GRL) methods opened new avenues for addressing complex, real-world problems represented by graphs. However, many graphs used in these applications comprise millions of nodes and billions of edges and are…

One of the hot topics in machine learning is the field of GNN. The complexity of graph data has imposed significant challenges on existing machine learning algorithms. Recently, many studies on extending deep learning approaches for graph…

Machine Learning · Computer Science 2024-03-22 László Kovács , Ali Jlidi

Graphs are a natural representation for systems based on relations between connected entities. Combinatorial optimization problems, which arise when considering an objective function related to a process of interest on discrete structures,…

Machine Learning · Computer Science 2024-08-21 Victor-Alexandru Darvariu , Stephen Hailes , Mirco Musolesi

This tutorial review provides a guiding reference to researchers who want to have an overview of the large body of literature about graph spanners. It reviews the current literature covering various research streams about graph spanners,…

Graphs are common mathematical structures that are visual and intuitive. They constitute a natural and seamless way for system modelling in science, engineering and beyond, including computer science, biology, business process modelling,…

Formal Languages and Automata Theory · Computer Science 2020-12-03 Berthold Hoffmann , Mark Minas

Computer programming textbooks and software documentations often contain flowcharts to illustrate the flow of an algorithm or procedure. Modern OCR engines often tag these flowcharts as graphics and ignore them in further processing. In…

Computer Vision and Pattern Recognition · Computer Science 2025-01-30 Shreya Shukla , Prajwal Gatti , Yogesh Kumar , Vikash Yadav , Anand Mishra

Pattern-based file access is a fundamental but often under-documented aspect of computational research. The Python glob module provides a simple yet powerful way to search, filter, and ingest files using wildcard patterns, enabling scalable…

Software Engineering · Computer Science 2025-09-12 Sidney Shapiro

Graph learning is naturally well suited for use in symbolic, object-centric planning due to its ability to exploit relational structures exhibited in planning domains and to take as input planning instances with arbitrary numbers of…

Artificial Intelligence · Computer Science 2025-01-08 Dillon Z. Chen , Sylvie Thiébaux

This paper presents `chipfiring`, a comprehensive Python package for the mathematical analysis of chip-firing games on finite graphs. The package provides a robust toolkit for defining graphs and chip configurations (divisors), performing…

Combinatorics · Mathematics 2025-08-05 Dhyey Dharmendrakumar Mavani , Tairan Ji , Nathan Pflueger

Today's highly heterogeneous computing landscape places a burden on programmers wanting to achieve high performance on a reasonably broad cross-section of machines. To do so, computations need to be expressed in many different but…

Programming Languages · Computer Science 2014-06-02 Andreas Klöckner

Pretrained Language Models (PLMs) such as BERT have revolutionized the landscape of Natural Language Processing (NLP). Inspired by their proliferation, tremendous efforts have been devoted to Pretrained Graph Models (PGMs). Owing to the…

Machine Learning · Computer Science 2022-03-22 Jun Xia , Yanqiao Zhu , Yuanqi Du , Stan Z. Li

Mining graph data has become a popular research topic in computer science and has been widely studied in both academia and industry given the increasing amount of network data in the recent years. However, the huge amount of network data…

Machine Learning · Computer Science 2020-01-03 Wenwu Zhu , Xin Wang , Peng Cui

We introduce a Python package that provides simply and unified access to a collection of datasets from fundamental physics research - including particle physics, astroparticle physics, and hadron- and nuclear physics - for supervised…

Conan is a C++ library created for the accurate and efficient modelling, inference and analysis of complex networks. It implements the generation and modification of graphs according to several published models, as well as the unexpensive…

Quantitative Methods · Quantitative Biology 2010-12-02 Ricardo Honorato-Zimmer , Bryan Reynaert , Ignacio Vergara , Tomas Perez-Acle

The democratization of Data Mining has been widely successful thanks in part to powerful and easy-to-use Machine Learning libraries. These libraries have been particularly tailored to tackle Supervised Learning. However, strong supervision…

Machine Learning · Computer Science 2023-08-21 Pierre Nodet , Vincent Lemaire , Alexis Bondu , Antoine Cornuéjols

Combinatorial optimization problems are prevalent across a wide variety of domains. These problems are often nuanced, their optimal solutions might not be efficiently obtainable, and they may require lots of time and compute resources to…

Machine Learning · Computer Science 2025-07-03 Akshay Sathiya , Rohit Pandey

Performance assessment is a key issue in the process of proposing new machine learning/statistical estimators. A possible method to complete such task is by using simulation studies, which can be defined as the procedure of estimating and…

Methodology · Statistics 2020-07-21 Marco H A Inácio

Literate programming - the bringing together of program code and natural language narratives - has become a ubiquitous approach in the realm of data science. This methodology is appealing as well for the domain of Density Functional Theory…

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