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It is challenging for generative models to learn a distribution over graphs because of the lack of permutation invariance: nodes may be ordered arbitrarily across graphs, and standard graph alignment is combinatorial and notoriously…

Social and Information Networks · Computer Science 2023-01-27 Kimia Shayestehfard , Dana Brooks , Stratis Ioannidis

Biological processes underlying the basic functions of a cell involve complex interactions between genes. From a technical point of view, these interactions can be represented through a graph where genes and their connections are,…

Methodology · Statistics 2020-11-24 Thi Kim Hue Nguyen , Monica Chiogna

This paper proposes and analyzes a novel clustering algorithm that combines graph-based diffusion geometry with techniques based on density and mode estimation. The proposed method is suitable for data generated from mixtures of…

Machine Learning · Statistics 2019-01-01 Mauro Maggioni , James M. Murphy

We describe computationally efficient methods for learning mixtures in which each component is a directed acyclic graphical model (mixtures of DAGs or MDAGs). We argue that simple search-and-score algorithms are infeasible for a variety of…

Machine Learning · Computer Science 2015-05-19 Bo Thiesson , Christopher Meek , David Maxwell Chickering , David Heckerman

Graphs are ubiquitous in modelling relational structures. Recent endeavours in machine learning for graph-structured data have led to many architectures and learning algorithms. However, the graph used by these algorithms is often…

Machine Learning · Statistics 2020-06-25 Soumyasundar Pal , Saber Malekmohammadi , Florence Regol , Yingxue Zhang , Yishi Xu , Mark Coates

Tree structured graphical models are powerful at expressing long range or hierarchical dependency among many variables, and have been widely applied in different areas of computer science and statistics. However, existing methods for…

Machine Learning · Statistics 2014-01-17 Le Song , Han Liu , Ankur Parikh , Eric Xing

Structural learning of directed acyclic graphs (DAGs) or Bayesian networks has been studied extensively under the assumption that data are independent. We propose a new Gaussian DAG model for dependent data which assumes the observations…

Machine Learning · Statistics 2021-07-30 Hangjian Li , Oscar Hernan Madrid Padilla , Qing Zhou

Learning directed acyclic graphs (DAGs) is long known a critical challenge at the core of probabilistic and causal modeling. The NoTears approach of (Zheng et al., 2018), through a differentiable function involving the matrix exponential…

Machine Learning · Computer Science 2023-10-11 Shuyu Dong , Michèle Sebag

Directed acyclic graph (DAG) models are widely used to represent causal relationships among random variables in many application domains. This paper studies a special class of non-Gaussian DAG models, where the conditional variance of each…

Machine Learning · Statistics 2021-11-03 Wei Zhou , Xin He , Wei Zhong , Junhui Wang

Many real-world systems studied are governed by complex, nonlinear dynamics. By modeling these dynamics, we can gain insight into how these systems work, make predictions about how they will behave, and develop strategies for controlling…

Machine Learning · Statistics 2019-06-05 Josue Nassar , Scott W. Linderman , Monica Bugallo , Il Memming Park

We consider the problem of structure recovery in a graphical model of a tree where some variables are latent. Specifically, we focus on the Gaussian case, which can be reformulated as a well-studied problem: recovering a semi-labeled tree…

Statistics Theory · Mathematics 2025-08-12 Luc Devroye , Gabor Lugosi , Piotr Zwiernik

Learning the unique directed acyclic graph corresponding to an unknown causal model is a challenging task. Methods based on functional causal models can identify a unique graph, but either suffer from the curse of dimensionality or impose…

Machine Learning · Computer Science 2025-01-14 Sujai Hiremath , Jacqueline R. M. A. Maasch , Mengxiao Gao , Promit Ghosal , Kyra Gan

We consider graphical models based on a recursive system of linear structural equations. This implies that there is an ordering, $\sigma$, of the variables such that each observed variable $Y_v$ is a linear function of a variable specific…

Methodology · Statistics 2019-06-28 Y. Samuel Wang , Mathias Drton

Existing causal discovery methods based on combinatorial optimization or search are slow, prohibiting their application on large-scale datasets. In response, more recent methods attempt to address this limitation by formulating causal…

Machine Learning · Computer Science 2024-03-07 Victor Akinwande , J. Zico Kolter

In Bayesian learning of Gaussian graphical model structure, it is common to restrict attention to certain classes of graphs and approximate the posterior distribution by repeatedly moving from one graph to another, using MCMC or methods…

Machine Learning · Statistics 2021-09-01 Edmund Jones

Causal discovery is a difficult problem that typically relies on strong assumptions on the data-generating model, such as non-Gaussianity. In practice, many modern applications provide multiple related views of the same system, which has…

Machine Learning · Computer Science 2025-09-29 Ambroise Heurtebise , Omar Chehab , Pierre Ablin , Alexandre Gramfort , Aapo Hyvärinen

This work establishes a novel link between the problem of PAC-learning high-dimensional graphical models and the task of (efficient) counting and sampling of graph structures, using an online learning framework. We observe that if we apply…

Machine Learning · Computer Science 2025-11-14 Arnab Bhattacharyya , Sutanu Gayen , Philips George John , Sayantan Sen , N. V. Vinodchandran

We present an integrated approach for structure and parameter estimation in latent tree graphical models. Our overall approach follows a "divide-and-conquer" strategy that learns models over small groups of variables and iteratively merges…

Machine Learning · Computer Science 2019-12-19 Furong Huang , Niranjan U. N. , Ioakeim Perros , Robert Chen , Jimeng Sun , Anima Anandkumar

We establish a new framework for statistical estimation of directed acyclic graphs (DAGs) when data are generated from a linear, possibly non-Gaussian structural equation model. Our framework consists of two parts: (1) inferring the…

Machine Learning · Statistics 2013-11-15 Po-Ling Loh , Peter Bühlmann

In this paper we study the space of second- and third-order moment tensors of random vectors which satisfy a Linear Non-Gaussian Acyclic Model (LiNGAM). In such a causal model each entry $X_i$ of the random vector $X$ corresponds to a…

Statistics Theory · Mathematics 2025-07-03 Cole Gigliotti , Elina Robeva