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Recent work has shown the potential of graph neural networks to efficiently predict material properties, enabling high-throughput screening of materials. Training these models, however, often requires large quantities of labelled data,…

Machine Learning · Computer Science 2022-11-28 Teddy Koker , Keegan Quigley , Will Spaeth , Nathan C. Frey , Lin Li

Self-supervised learning (SSL) is a machine learning approach where the data itself provides supervision, eliminating the need for external labels. The model is forced to learn about the data structure or context by solving a pretext task.…

Computer Vision and Pattern Recognition · Computer Science 2024-07-19 Markus Marks , Manuel Knott , Neehar Kondapaneni , Elijah Cole , Thijs Defraeye , Fernando Perez-Cruz , Pietro Perona

Graph contrastive learning has emerged as a powerful technique for learning graph representations that are robust and discriminative. However, traditional approaches often neglect the critical role of subgraph structures, particularly the…

Machine Learning · Computer Science 2025-03-14 Tianhao Peng , Xuhong Li , Haitao Yuan , Yuchen Li , Haoyi Xiong

Medical image analysis suffers from a shortage of data, whether annotated or not. This becomes even more pronounced when it comes to 3D medical images. Self-Supervised Learning (SSL) can partially ease this situation by using unlabeled…

Computer Vision and Pattern Recognition · Computer Science 2024-07-08 Fei Gao , Siwen Wang , Fandong Zhang , Hong-Yu Zhou , Yizhou Wang , Churan Wang , Gang Yu , Yizhou Yu

Graph Contrastive Learning (GCL) is a powerful self-supervised learning framework that performs data augmentation through graph perturbations, with growing applications in the analysis of biological networks such as Gene Regulatory Networks…

Machine Learning · Computer Science 2026-02-20 Sho Oshima , Yuji Okamoto , Taisei Tosaki , Ryosuke Kojima

Graphs serve as versatile data structures in numerous real-world domains-including social networks, molecular biology, and knowledge graphs-by capturing intricate relational information among entities. Among graph-based learning techniques,…

Machine Learning · Computer Science 2025-05-21 Chou-Ying Hsieh , Chun-Fu Jang , Cheng-En Hsieh , Qian-Hui Chen , Sy-Yen Kuo

The objective of this paper is to learn semantic representations for sleep stage classification from raw physiological time series. Although supervised methods have gained remarkable performance, they are limited in clinical situations due…

Signal Processing · Electrical Eng. & Systems 2021-10-20 Hongjun Zhang , Jing Wang , Qinfeng Xiao , Jiaoxue Deng , Youfang Lin

Self-supervised learning (SSL) has great potential for molecular representation learning given the complexity of molecular graphs, the large amounts of unlabelled data available, the considerable cost of obtaining labels experimentally, and…

Machine Learning · Computer Science 2023-11-30 Yuankai Luo , Lei Shi , Veronika Thost

Heterogeneous graphs (HGs) are composed of multiple types of nodes and edges, making it more effective in capturing the complex relational structures inherent in the real world. However, in real-world scenarios, labeled data is often…

Machine Learning · Computer Science 2025-08-20 Ruobing Jiang , Yacong Li , Haobing Liu , Yanwei Yu

Molecular property prediction refers to the task of labeling molecules with some biochemical properties, playing a pivotal role in the drug discovery and design process. Recently, with the advancement of machine learning, deep…

Molecular Networks · Quantitative Biology 2024-01-10 Zeyu Wang , Tianyi Jiang , Jinhuan Wang , Qi Xuan

Self-supervised learning (SSL) has emerged as a powerful technique for learning rich representations from unlabeled data. The data representations are able to capture many underlying attributes of data, and be useful in downstream…

Machine Learning · Computer Science 2023-12-01 Weicheng Zhu , Sheng Liu , Carlos Fernandez-Granda , Narges Razavian

3D-aware Generative Adversarial Networks (3D-GANs) currently exhibit artifacts in their 3D geometrical modeling, such as mesh imperfections and holes. These shortcomings are primarily attributed to the limited availability of annotated 3D…

Computer Vision and Pattern Recognition · Computer Science 2023-12-20 Jiarong Guo , Xiaogang Xu , Hengshuang Zhao

Self-supervised learning (SSL) has emerged as a powerful technique for improving the efficiency and effectiveness of deep learning models. Contrastive methods are a prominent family of SSL that extract similar representations of two…

While contrastive approaches of self-supervised learning (SSL) learn representations by minimizing the distance between two augmented views of the same data point (positive pairs) and maximizing views from different data points (negative…

Machine Learning · Computer Science 2021-10-11 Yuandong Tian , Xinlei Chen , Surya Ganguli

Although supervised learning has been highly successful in improving the state-of-the-art in the domain of image-based computer vision in the past, the margin of improvement has diminished significantly in recent years, indicating that a…

Computer Vision and Pattern Recognition · Computer Science 2023-05-24 Utku Ozbulak , Hyun Jung Lee , Beril Boga , Esla Timothy Anzaku , Homin Park , Arnout Van Messem , Wesley De Neve , Joris Vankerschaver

Contrastive learning has been widely applied to graph representation learning, where the view generators play a vital role in generating effective contrastive samples. Most of the existing contrastive learning methods employ pre-defined…

Machine Learning · Computer Science 2022-01-04 Yihang Yin , Qingzhong Wang , Siyu Huang , Haoyi Xiong , Xiang Zhang

Graph Contrastive Learning (GCL) has recently drawn much research interest for learning generalizable node representations in a self-supervised manner. In general, the contrastive learning process in GCL is performed on top of the…

Machine Learning · Computer Science 2022-12-06 Kaize Ding , Yancheng Wang , Yingzhen Yang , Huan Liu

Dual embodied-symbolic concept representations are the foundation for deep learning and symbolic AI integration. We discuss the use of dual embodied-symbolic concept representations for molecular graph representation learning, specifically…

Machine Learning · Computer Science 2022-05-16 Daniel T. Chang

Accurate prediction of material properties facilitates the discovery of novel materials with tailored functionalities. Deep learning models have recently shown superior accuracy and flexibility in capturing structure-property relationships.…

Machine Learning · Computer Science 2025-04-30 Chowdhury Mohammad Abid Rahman , Aldo H. Romero , Prashnna K. Gyawali

Self-supervised learning (SSL) of graph neural networks is emerging as a promising way of leveraging unlabeled data. Currently, most methods are based on contrastive learning adapted from the image domain, which requires view generation and…

Machine Learning · Computer Science 2022-07-12 Yaochen Xie , Zhao Xu , Shuiwang Ji
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