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Related papers: OpenMedIA: Open-Source Medical Image Analysis Tool…

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Biomedical challenges have become the de facto standard for benchmarking biomedical image analysis algorithms. While the number of challenges is steadily increasing, surprisingly little effort has been invested in ensuring high quality…

Computer Vision and Pattern Recognition · Computer Science 2019-12-06 Manuel Wiesenfarth , Annika Reinke , Bennett A. Landman , Manuel Jorge Cardoso , Lena Maier-Hein , Annette Kopp-Schneider

Fine-Grained Image Recognition (FGIR) is a fundamental and challenging task in computer vision and multimedia that plays a crucial role in Intellectual Economy and Industrial Internet applications. However, the absence of a unified…

Computer Vision and Pattern Recognition · Computer Science 2023-11-27 Jiabei He , Yang Shen , Xiu-Shen Wei , Ye Wu

Three-dimensional medical image data and computer-aided decision making, particularly using deep learning, are becoming increasingly important in the medical field. To aid in these developments we introduce PR3DICTR: Platform for Research…

Computer Vision and Pattern Recognition · Computer Science 2026-04-06 Daniel C. MacRae , Luuk van der Hoek , Robert van der Wal , Suzanne P. M. de Vette , Hendrike Neh , Baoqiang Ma , Peter M. A. van Ooijen , Lisanne V. van Dijk

The field of medical imaging AI is currently undergoing rapid transformations, with methodical research increasingly translated into clinical practice. Despite these successes, research suffers from knowledge silos, hindering collaboration…

Computer Vision and Pattern Recognition · Computer Science 2026-01-21 Patrick Godau , Akriti Srivastava , Constantin Ulrich , Tim Adler , Klaus Maier-Hein , Lena Maier-Hein

The rapid developments in artificial intelligence (AI) research in radiology have produced numerous models that are scattered across various platforms and sources, limiting discoverability, reproducibility and clinical translation. Herein,…

Finding a realistic deformation that transforms one image into another, in case large deformations are required, is considered a key challenge in medical image analysis. Having a proper image registration approach to achieve this could…

Computer Vision and Pattern Recognition · Computer Science 2023-03-10 Georgios Andreadis , Peter A. N. Bosman , Tanja Alderliesten

Artificial intelligence (AI) models trained using medical images for clinical tasks often exhibit bias in the form of disparities in performance between subgroups. Since not all sources of biases in real-world medical imaging data are…

Computer Vision and Pattern Recognition · Computer Science 2024-07-02 Emma A. M. Stanley , Raissa Souza , Anthony Winder , Vedant Gulve , Kimberly Amador , Matthias Wilms , Nils D. Forkert

Difficulty replicating baselines, high computational costs, and required domain expertise create persistent barriers to clinical AI research. To address these challenges, we introduce PyHealth 2.0, an enhanced clinical deep learning toolkit…

Existing biomedical benchmarks do not provide end-to-end infrastructure for training, evaluation, and inference of models that integrate multimodal biological data and a broad range of machine learning tasks in therapeutics. We present…

Machine Learning · Computer Science 2026-01-23 Alejandro Velez-Arce , Jesus Caraballo , Marinka Zitnik

Clinical decision-making is inherently complex, often influenced by cognitive biases, incomplete information, and case ambiguity. Large Language Models (LLMs) have shown promise as tools for supporting clinical decision-making, yet their…

Machine Learning · Computer Science 2025-07-10 Burcu Sayin , Ipek Baris Schlicht , Ngoc Vo Hong , Sara Allievi , Jacopo Staiano , Pasquale Minervini , Andrea Passerini

Medical image analysis (MedIA) has become an essential tool in medicine and healthcare, aiding in disease diagnosis, prognosis, and treatment planning, and recent successes in deep learning (DL) have made significant contributions to its…

Image and Video Processing · Electrical Eng. & Systems 2024-12-10 Jee Seok Yoon , Kwanseok Oh , Yooseung Shin , Maciej A. Mazurowski , Heung-Il Suk

The increasing interest in developing Artificial Intelligence applications in the medical domain, suffers from the lack of high-quality data set, mainly due to privacy-related issues. In addition, the recent increase in Vision Language…

Databases · Computer Science 2025-07-18 Irene Siragusa , Salvatore Contino , Massimo La Ciura , Rosario Alicata , Roberto Pirrone

In the era of data-driven science, conducting computational experiments that involve analysing large datasets using heterogeneous computational clusters, is part of the everyday routine for many scientists. Moreover, to ensure the…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-23 Thanasis Vergoulis , Konstantinos Zagganas , Loukas Kavouras , Martin Reczko , Stelios Sartzetakis , Theodore Dalamagas

Medical imaging analysis faces challenges such as data scarcity, high annotation costs, and privacy concerns. This paper introduces the Medical AI for Synthetic Imaging (MAISI), an innovative approach using the diffusion model to generate…

Image and Video Processing · Electrical Eng. & Systems 2025-12-16 Pengfei Guo , Can Zhao , Dong Yang , Ziyue Xu , Vishwesh Nath , Yucheng Tang , Benjamin Simon , Mason Belue , Stephanie Harmon , Baris Turkbey , Daguang Xu

Ultrasound (US) is one of the most widely used medical imaging modalities, thanks to its low cost, portability, real-time feedback, and absence of ionizing radiation. However, US image interpretation remains highly operator-dependent and…

Computer Vision and Pattern Recognition · Computer Science 2025-11-17 Xiaoyu Zheng , Xu Chen , Awais Rauf , Qifan Fu , Benedetta Monosi , Felice Rivellese , Myles J. Lewis , Shaogang Gong , Gregory Slabaugh

Medical images are acquired at high resolutions with large fields of view in order to capture fine-grained features necessary for clinical decision-making. Consequently, training deep learning models on medical images can incur large…

Obtaining standardized crowdsourced benchmark of computational methods is a major issue in data science communities. Dedicated frameworks enabling fair benchmarking in a unified environment are yet to be developed. Here we introduce…

Machine Learning · Computer Science 2022-06-28 Zhen Xu , Sergio Escalera , Isabelle Guyon , Adrien Pavão , Magali Richard , Wei-Wei Tu , Quanming Yao , Huan Zhao

Medicine is rife with high-stakes uncertainty. Doctors routinely make clinical judgments and decisions that juggle many fundamental unknowns, like predictions about what might be causing a patients' symptoms or decisions about what…

Health informatics research is characterized by diverse data modalities, rapid knowledge expansion, and the need to integrate insights across biomedical science, data analytics, and clinical practice. These characteristics make it…

Artificial Intelligence · Computer Science 2025-09-24 Yuxiao Cheng , Jinli Suo

We present the Open MatSci ML Toolkit: a flexible, self-contained, and scalable Python-based framework to apply deep learning models and methods on scientific data with a specific focus on materials science and the OpenCatalyst Dataset. Our…

Machine Learning · Computer Science 2023-09-01 Santiago Miret , Kin Long Kelvin Lee , Carmelo Gonzales , Marcel Nassar , Matthew Spellings