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We study the problem of learning a hypergraph via edge detecting queries. In this problem, a learner queries subsets of vertices of a hidden hypergraph and observes whether these subsets contain an edge or not. In general, learning a…
We study the problem of maximizing the number of full degree vertices in a spanning tree $T$ of a graph $G$; that is, the number of vertices whose degree in $T$ equals its degree in $G$. In cubic graphs, this problem is equivalent to…
In this paper, we tackle structure learning of Directed Acyclic Graphs (DAGs), with the idea of exploiting available prior knowledge of the domain at hand to guide the search of the best structure. In particular, we assume to know the…
We present a new fast all-pairs shortest path algorithm for unweighted graphs. In breadth-first search which is said to representative and fast in unweighted graphs, the average number of accesses to adjacent vertices (expressed by…
In distance query reconstruction, we wish to reconstruct the edge set of a hidden graph by asking as few distance queries as possible to an oracle. Given two vertices $u$ and $v$, the oracle returns the shortest path distance between $u$…
With recent advances in high-throughput cell biology the amount of cellular biological data has grown drastically. Such data is often modeled as graphs (also called networks) and studying them can lead to new insights into molecule-level…
We propose a new method for embedding graphs while preserving directed edge information. Learning such continuous-space vector representations (or embeddings) of nodes in a graph is an important first step for using network information…
A Bayesian network is a directed acyclic graph that represents statistical dependencies between variables of a joint probability distribution. A fundamental task in data science is to learn a Bayesian network from observed data.…
An important tool in analyzing complex social and information networks is s-t simple path counting, which is known to be #P-complete. In this paper, we study efficient s-t simple path counting in directed graphs. For a given pair of…
We study random graph models for directed acyclic graphs, an important class of networks that includes citation networks, food webs, and feed-forward neural networks among others. We propose two specific models, roughly analogous to the…
A mixed graph $G$ is a graph that consists of both undirected and directed edges. An orientation of $G$ is formed by orienting all the undirected edges of $G$, i.e., converting each undirected edge $\{u,v\}$ into a directed edge that is…
For a fixed property (graph class) ${\Pi}$, given a graph G and an integer k, the ${\Pi}$-deletion problem consists in deciding if we can turn $G$ into a graph with the property ${\Pi}$ by deleting at most $k$ edges. The ${\Pi}$-deletion…
Deep learning-based networks are among the most prominent methods to learn linear patterns and extract this type of information from diverse imagery conditions. Here, we propose a deep learning approach based on graphs to detect plantation…
We investigate a graph probing problem in which an agent has only an incomplete view $G' \subsetneq G$ of the network and wishes to explore the network with least effort. In each step, the agent selects a node $u$ in $G'$ to probe. After…
The families EPT (resp. EPG) Edge Intersection Graphs of Paths in a tree (resp. in a grid) are well studied graph classes. Recently we introduced the graph classes Edge-Intersecting and Non-Splitting Paths in a Tree ENPT, and in a Grid…
Simultaneous Geometric Embedding (SGE) asks whether, for a given collection of graphs on the same vertex set V, there is an embedding of V in the plane that admits a crossing-free drawing with straightline edges for each of the given…
Suppose that there is a family of $n$ random points $X_v$ for $v \in V$, independently and uniformly distributed in the square $\left[-\sqrt{n}/2,\sqrt{n}/2\right]^2$ of area $n$. We do not see these points, but learn about them in one of…
Despite the enormous success of graph neural networks (GNNs), most existing GNNs can only be applicable to undirected graphs where relationships among connected nodes are two-way symmetric (i.e., information can be passed back and forth).…
We study the problem of distance-preserving graph compression for weighted paths and trees. The problem entails a weighted graph $G = (V, E)$ with non-negative weights, and a subset of edges $E^{\prime} \subset E$ which needs to be removed…
We study the computational complexity of routing multiple objects through a network in such a way that only few collisions occur: Given a graph $G$ with two distinct terminal vertices and two positive integers $p$ and $k$, the question is…