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Latent variable models such as the Variational Auto-Encoder (VAE) have become a go-to tool for analyzing biological data, especially in the field of single-cell genomics. One remaining challenge is the interpretability of latent variables…

Genomics · Quantitative Biology 2023-02-20 Romain Lopez , Nataša Tagasovska , Stephen Ra , Kyunghyn Cho , Jonathan K. Pritchard , Aviv Regev

We present a method that computes an interpretable representation of material appearance within a highly compact, disentangled latent space. This representation is learned in a self-supervised fashion using an adapted FactorVAE. We train…

Graphics · Computer Science 2025-07-18 Santiago Jimenez-Navarro , Julia Guerrero-Viu , Belen Masia

Controllable timbre synthesis has been a subject of research for several decades, and deep neural networks have been the most successful in this area. Deep generative models such as Variational Autoencoders (VAEs) have the ability to…

Sound · Computer Science 2023-07-21 Anastasia Natsiou , Luca Longo , Sean O'Leary

When working with textual data, a natural application of disentangled representations is fair classification where the goal is to make predictions without being biased (or influenced) by sensitive attributes that may be present in the data…

Computation and Language · Computer Science 2022-10-10 Pierre Colombo , Guillaume Staerman , Nathan Noiry , Pablo Piantanida

With the explosion of graph-structured data, link prediction has emerged as an increasingly important task. Embedding methods for link prediction utilize neural networks to generate node embeddings, which are subsequently employed to…

Machine Learning · Computer Science 2023-06-21 Jun Fu , Xiaojuan Zhang , Shuang Li , Dali Chen

We present a deep-learning Variational Encoder-Decoder (VED) framework for learning data-driven low-dimensional representations of the relationship between high-dimensional parameters of a physical system and the system's high-dimensional…

Machine Learning · Computer Science 2024-12-09 Subashree Venkatasubramanian , David A. Barajas-Solano

We view disentanglement learning as discovering an underlying structure that equivariantly reflects the factorized variations shown in data. Traditionally, such a structure is fixed to be a vector space with data variations represented by…

Machine Learning · Computer Science 2021-06-08 Xinqi Zhu , Chang Xu , Dacheng Tao

Disentangled representation learning finds compact, independent and easy-to-interpret factors of the data. Learning such has been shown to require an inductive bias, which we explicitly encode in a generative model of images. Specifically,…

Computer Vision and Pattern Recognition · Computer Science 2019-11-14 Nicki Skafte Detlefsen , Søren Hauberg

Recommendation models are typically trained on observational user interaction data, but the interactions between latent factors in users' decision-making processes lead to complex and entangled data. Disentangling these latent factors to…

Information Retrieval · Computer Science 2023-04-18 Siyu Wang , Xiaocong Chen , Quan Z. Sheng , Yihong Zhang , Lina Yao

Distributions are fundamental statistical elements that play essential theoretical and practical roles. The article discusses experiences of training neural networks to classify univariate empirical distributions and to represent them on…

Machine Learning · Computer Science 2020-04-07 Alex Glushkovsky

Disentangled representation learning offers useful properties such as dimension reduction and interpretability, which are essential to modern deep learning approaches. Although deep learning techniques have been widely applied to…

Machine Learning · Computer Science 2022-04-11 Sichen Zhao , Wei Shao , Jeffrey Chan , Flora D. Salim

We propose a family of novel hierarchical Bayesian deep auto-encoder models capable of identifying disentangled factors of variability in data. While many recent attempts at factor disentanglement have focused on sophisticated learning…

Machine Learning · Computer Science 2019-09-10 Minyoung Kim , Yuting Wang , Pritish Sahu , Vladimir Pavlovic

Deep learning models have achieved remarkable success in different areas of machine learning over the past decade; however, the size and complexity of these models make them difficult to understand. In an effort to make them more…

Computer Vision and Pattern Recognition · Computer Science 2022-06-20 Vikram V. Ramaswamy , Sunnie S. Y. Kim , Nicole Meister , Ruth Fong , Olga Russakovsky

The effective application of representation learning to real-world problems requires both techniques for learning useful representations, and also robust ways to evaluate properties of representations. Recent work in disentangled…

Machine Learning · Computer Science 2020-12-16 Salman Mohammadi , Anders Kirk Uhrenholt , Bjørn Sand Jensen

By composing graphical models with deep learning architectures, we learn generative models with the strengths of both frameworks. The structured variational autoencoder (SVAE) inherits structure and interpretability from graphical models,…

Machine Learning · Computer Science 2023-11-15 Harry Bendekgey , Gabriel Hope , Erik B. Sudderth

Purpose: Handling heterogeneous and mixed data types has become increasingly critical with the exponential growth in real-world databases. While deep generative models attempt to merge diverse data views into a common latent space, they…

Machine Learning · Computer Science 2024-10-23 Alejandro Guerrero-López , Carlos Sevilla-Salcedo , Vanessa Gómez-Verdejo , Pablo M. Olmos

Variational autoencoder (VAE) estimates the posterior parameters (mean and variance) of latent variables corresponding to each input data. While it is used for many tasks, the transparency of the model is still an underlying issue. This…

Machine Learning · Statistics 2023-02-23 Akira Nakagawa , Keizo Kato , Taiji Suzuki

The use of well-disentangled representations offers many advantages for downstream tasks, e.g. an increased sample efficiency, or better interpretability. However, the quality of disentangled interpretations is often highly dependent on the…

Machine Learning · Computer Science 2023-03-03 Benjamin Estermann , Roger Wattenhofer

We present a self-supervised method to disentangle factors of variation in high-dimensional data that does not rely on prior knowledge of the underlying variation profile (e.g., no assumptions on the number or distribution of the individual…

Machine Learning · Computer Science 2022-09-23 Eric Yeats , Frank Liu , David Womble , Hai Li

Unsupervised learning enables modeling complex images without the need for annotations. The representation learned by such models can facilitate any subsequent analysis of large image datasets. However, some generative factors that cause…

Image and Video Processing · Electrical Eng. & Systems 2020-08-27 Maxime W. Lafarge , Josien P. W. Pluim , Mitko Veta