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We study pattern formation in a chemotaxis model of bacteria and soil carbon dynamics as an example system where transient dynamics can give rise to pattern formation outside of Turing unstable regimes. We use a detailed analysis of the…

Diffusion models generate structure by progressively transforming noise into data, yet the mechanisms underlying this transition remain poorly understood. In this work, we show that pattern formation in trained diffusion models can be…

Machine Learning · Computer Science 2026-04-29 Luca Ambrogioni

Tipping points have been actively studied in various applications as well as from a mathematical viewpoint. A main technique to theoretically understand early-warning signs for tipping points is to use the framework of fast-slow stochastic…

Pattern Formation and Solitons · Physics 2018-08-29 Francesco Romano , Christian Kuehn

Nakao and Mikhailov proposed using continuous models (mean-field models) to study reaction-diffusion systems on networks and the corresponding Turing patterns. This work aims to show that p-adic analysis is the natural tool to carry out…

Analysis of PDEs · Mathematics 2022-05-03 W. A. Zúñiga-Galindo

In this work we study the effect of density dependent nonlinear diffusion on pattern formation in the Lengyel--Epstein system. Via the linear stability analysis we determine both the Turing and the Hopf instability boundaries and we show…

Pattern Formation and Solitons · Physics 2014-05-20 G. Gambino , M. C. Lombardo , M. Sammartino

Nonlinear parametric systems have been widely used in modeling nonlinear dynamics in science and engineering. Bifurcation analysis of these nonlinear systems on the parameter space are usually used to study the solution structure such as…

Numerical Analysis · Mathematics 2022-01-26 Wenrui Hao , Chunyue Zheng

In the current manuscript, a first two-patch model with Allee effect and nonlinear dispersal is presented. We study both the ODE case and the PDE case here. In the ODE model, the stability of the equilibrium points and the existence of…

Dynamical Systems · Mathematics 2023-10-17 Yue Xia , Lijuan Chen , Vaibhava Srivastava , Rana D. Parshad

Spatial distribution of the human population is distinctly heterogeneous, e.g. showing significant difference in the population density between urban and rural areas. In the historical perspective, i.e. on the timescale of centuries, the…

Adaptation and Self-Organizing Systems · Physics 2022-08-30 Anna Zincenko , Sergei Petrovskii , Vitaly Volpert

Analytically tracking patterns emerging from a small amplitude Turing instability to large amplitude remains a challenge as no general theory exists. In this paper, we consider a three component reaction-diffusion system with one of its…

Dynamical Systems · Mathematics 2023-11-06 Christopher Brown , Gianne Derks , Peter van Heijster , David J. B. Lloyd

Bifurcation theory is the usual analytic approach to study the parameter space of a dynamical system. Despite the great power of prediction of these techniques, fundamental limitations appear during the study of a given problem. Nonlinear…

Chaotic Dynamics · Physics 2023-10-02 Alexandre Wagemakers , Alvar Daza , Miguel A. F. Sanjuán

Turing patterns can be observed in reaction-diffusion systems where chemical species have different diffusion constants. In recent years, several studies investigated the effects of noise on Turing patterns and showed that the parameter…

Computational Physics · Physics 2013-10-30 Yang Cao , Radek Erban

Deep learning became the method of choice in recent year for solving a wide variety of predictive analytics tasks. For sequence prediction, recurrent neural networks (RNN) are often the go-to architecture for exploiting sequential…

Machine Learning · Computer Science 2016-11-09 Kin Gwn Lore , Daniel Stoecklein , Michael Davies , Baskar Ganapathysubramanian , Soumik Sarkar

Periodically forced turbulence is used as a test case to evaluate the predictions of two-equation and multiple-scale turbulence models in unsteady flows. The limitations of the two-equation model are shown to originate in the basic…

Fluid Dynamics · Physics 2010-09-02 Robert Rubinstein , Wouter J. T. Bos

Hyperbolic reaction-diffusion equations have recently attracted attention both for their application to a variety of biological and chemical phenomena, and for their distinct features in terms of propagation speed and novel instabilities…

Pattern Formation and Solitons · Physics 2022-08-17 Joshua Ritchie , Andrew L. Krause , Robert A. Van Gorder

Intracellular protein patterns govern essential cellular functions by dynamically redistributing proteins between membrane-bound and cytosolic states, conserving their total numbers. This review presents a theoretical framework for…

Biological Physics · Physics 2025-12-16 Erwin Frey , Henrik Weyer

The study of pattern-forming instabilities in reaction-diffusion systems on growing or otherwise time-dependent domains arises in a variety of settings, including applications in developmental biology, spatial ecology, and experimental…

Pattern Formation and Solitons · Physics 2022-07-11 Robert A. Van Gorder , Václav Klika , Andrew L. Krause

We study a reaction-advection-diffusion model of a target-offender-guardian system designed to capture interactions between urban crime and policing. Using Crandall-Rabinowitz bifurcation theory and spectral analysis, we establish rigorous…

Pattern Formation and Solitons · Physics 2026-04-15 Madi Yerlanov , Qi Wang , Nancy Rodriguez

Pattern formation is a widely observed phenomenon in diverse fields including materials physics, developmental biology and ecology, among many others. The physics underlying the patterns is specific to the mechanisms, and is encoded by…

Computational Engineering, Finance, and Science · Computer Science 2024-03-28 Z. Wang , X. Huan , K. Garikipati

Autocovariance of the error term in a time series model plays a key role in the estimation and inference for the model that it belongs to. Typically, some arbitrary parametric structure is assumed upon the error to simplify the estimation,…

Methodology · Statistics 2022-10-17 Yoon Bae Jun , Chae Young Lim , Kun Ho Kim

Reaction-diffusion systems have been proposed as a model for pattern formation and morphogenesis. The Fickian diffusion typically employed in these constructions model the Brownian motion of particles. The biological and chemical elements…

Quantitative Methods · Quantitative Biology 2023-11-09 Siddhartha Srivastava , Krishna Garikipati