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Hyperuniformity, the suppression of density fluctuations at large length scales, is observed across a wide variety of domains, from cosmology to condensed matter and biological systems. Although the standard definition of hyperuniformity…

Statistical Mechanics · Physics 2024-05-07 Marco Salvalaglio , Dominic J. Skinner , Jörn Dunkel , Axel Voigt

Topological Data Analysis (TDA) provides tools to describe the shape of data, but integrating topological features into deep learning pipelines remains challenging, especially when preserving local geometric structure rather than…

Machine Learning · Computer Science 2026-04-21 Elena Xinyi Wang , Arnur Nigmetov , Dmitriy Morozov

We introduce graphcodes, a novel multi-scale summary of the topological properties of a dataset that is based on the well-established theory of persistent homology. Graphcodes handle datasets that are filtered along two real-valued scale…

Algebraic Topology · Mathematics 2024-05-24 Michael Kerber , Florian Russold

Graph convolution (GConv) is a widely used technique that has been demonstrated to be extremely effective for graph learning applications, most notably node categorization. On the other hand, many GConv-based models do not quantify the…

Machine Learning · Computer Science 2022-07-27 Zhiqian Chen , Zonghan Zhang

Extended persistence is a technique from topological data analysis to obtain global multiscale topological information from a graph. This includes information about connected components and cycles that are captured by the so-called…

Machine Learning · Computer Science 2024-06-06 Simon Zhang , Soham Mukherjee , Tamal K. Dey

We propose a new way of thinking about one parameter persistence. We believe topological persistence is fundamentally not about decomposition theorems but a central role is played by a choice of metrics. Choosing a pseudometric between…

Algebraic Topology · Mathematics 2020-02-07 Wojciech Chachólski , Henri Riihimäki

In this paper, we introduce the persistence transformation, a novel methodology in Topological Data Analysis (TDA) for applications in time series data which can be obtained in various areas such as science, politics, economy, healthcare,…

Algebraic Topology · Mathematics 2024-01-31 Gideon Klaila , Anastasios Stefanou , Lena Ranke

In this paper we study the persistent homology associated with topological crackle generated by distributions with an unbounded support. Persistent homology is a topological and algebraic structure that tracks the creation and destruction…

Probability · Mathematics 2018-10-04 Takashi Owada , Omer Bobrowski

In this paper, we present a novel convolution theorem which encompasses the well known convolution theorem in (graph) signal processing as well as the one related to time-varying filters. Specifically, we show how a node-wise convolution…

Signal Processing · Electrical Eng. & Systems 2023-12-29 Alberto Natali , Geert Leus

Recent years have witnessed an increased interest in the application of persistent homology, a topological tool for data analysis, to machine learning problems. Persistent homology is known for its ability to numerically characterize the…

Neural and Evolutionary Computing · Computer Science 2016-08-29 Jen-Yu Liu , Shyh-Kang Jeng , Yi-Hsuan Yang

Network data can be conveniently modeled as a graph signal, where data values are assigned to nodes of a graph that describes the underlying network topology. Successful learning from network data is built upon methods that effectively…

Machine Learning · Computer Science 2021-05-26 Fernando Gama , Elvin Isufi , Geert Leus , Alejandro Ribeiro

Persistent homology is a method for probing topological properties of point clouds and functions. The method involves tracking the birth and death of topological features (2000) as one varies a tuning parameter. Features with short…

We prove an extension to the simplicial Nerve Lemma which establishes isomorphism of persistent homology groups, in the case where the covering spaces are filtered. While persistent homology is now widely used in topological data analysis,…

Algebraic Topology · Mathematics 2012-02-29 Maia Fraser

Multiparameter persistent homology has been largely neglected as an input to machine learning algorithms. We consider the use of lattice-based convolutional neural network layers as a tool for the analysis of features arising from…

Algebraic Topology · Mathematics 2022-09-01 Hans Riess , Jakob Hansen , Robert Ghrist

Representation learning on graphs is a fundamental problem that can be crucial in various tasks. Graph neural networks, the dominant approach for graph representation learning, are limited in their representation power. Therefore, it can be…

Machine Learning · Computer Science 2025-01-17 Zuoyu Yan , Qi Zhao , Ze Ye , Tengfei Ma , Liangcai Gao , Zhi Tang , Yusu Wang , Chao Chen

In this paper we introduce a statistic, the persistent homology transform (PHT), to model surfaces in $\mathbb{R}^3$ and shapes in $\mathbb{R}^2$. This statistic is a collection of persistence diagrams - multiscale topological summaries…

Statistics Theory · Mathematics 2014-07-16 Katharine Turner , Sayan Mukherjee , Doug M Boyer

This paper is a survey of persistent homology, primarily as it is used in topological data analysis. It includes the theory of persistence modules, as well as stability theorems for persistence barcodes, generalized persistence,…

Algebraic Topology · Mathematics 2020-04-03 Gunnar Carlsson

Multivector fields provide an avenue for studying continuous dynamical systems in a combinatorial framework. There are currently two approaches in the literature which use persistent homology to capture changes in combinatorial dynamical…

Dynamical Systems · Mathematics 2021-07-07 Tamal K. Dey , Marian Mrozek , Ryan Slechta

A number of machine learning tasks entail a high degree of invariance: the data distribution does not change if we act on the data with a certain group of transformations. For instance, labels of images are invariant under translations of…

Machine Learning · Statistics 2021-03-01 Song Mei , Theodor Misiakiewicz , Andrea Montanari

A method is presented for the distributed computation of persistent homology, based on an extension of the generalized Mayer-Vietoris principle to filtered spaces. Cellular cosheaves and spectral sequences are used to compute global…

Algebraic Topology · Mathematics 2023-08-11 Iris H. R. Yoon , Robert Ghrist
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