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This article reviews recent advances in applying natural language processing (NLP) to Electronic Health Records (EHRs) for computational phenotyping. NLP-based computational phenotyping has numerous applications including diagnosis…

Computation and Language · Computer Science 2018-06-18 Zexian Zeng , Yu Deng , Xiaoyu Li , Tristan Naumann , Yuan Luo

Unsupervised cross-lingual transfer involves transferring knowledge between languages without explicit supervision. Although numerous studies have been conducted to improve performance in such tasks by focusing on cross-lingual knowledge,…

Computation and Language · Computer Science 2024-04-26 Jianyu Zheng , Fengfei Fan , Jianquan Li

With promising results of machine learning based models in computer vision, applications on medical imaging data have been increasing exponentially. However, generalizations to complex real-world clinical data is a persistent problem. Deep…

Computer Vision and Pattern Recognition · Computer Science 2020-07-27 Nooshin Mojab , Vahid Noroozi , Darvin Yi , Manoj Prabhakar Nallabothula , Abdullah Aleem , Phillip S. Yu , Joelle A. Hallak

The objective of our study is to determine whether using English tools to extract and normalize French medical concepts on translations provides comparable performance to French models trained on a set of annotated French clinical notes. We…

Computation and Language · Computer Science 2023-06-06 Christel Gérardin , Yuhan Xiong , Perceval Wajsbürt , Fabrice Carrat , Xavier Tannier

Zero-resource cross-lingual transfer approaches aim to apply supervised models from a source language to unlabelled target languages. In this paper we perform an in-depth study of the two main techniques employed so far for cross-lingual…

Computation and Language · Computer Science 2023-04-28 Iker García-Ferrero , Rodrigo Agerri , German Rigau

We propose a method for zero-resource domain adaptation of DNN acoustic models, for use in low-resource situations where the only in-language training data available may be poorly matched to the intended target domain. Our method uses a…

Audio and Speech Processing · Electrical Eng. & Systems 2019-10-31 Alberto Abad , Peter Bell , Andrea Carmantini , Steve Renals

In recent years, supervised machine learning models have demonstrated tremendous success in a variety of application domains. Despite the promising results, these successful models are data hungry and their performance relies heavily on the…

Machine Learning · Computer Science 2018-12-05 Azin Asgarian , Parinaz Sobhani , Ji Chao Zhang , Madalin Mihailescu , Ariel Sibilia , Ahmed Bilal Ashraf , Babak Taati

This study introduces a novel knowledge enhanced tokenisation mechanism, K-Tokeniser, for clinical text processing. Technically, at initialisation stage, K-Tokeniser populates global representations of tokens based on semantic types of…

Computation and Language · Computer Science 2024-06-21 Abul Hasan , Jinge Wu , Quang Ngoc Nguyen , Salomé Andres , Imane Guellil , Huayu Zhang , Arlene Casey , Beatrice Alex , Bruce Guthrie , Honghan Wu

Mining electronic health records for patients who satisfy a set of predefined criteria is known in medical informatics as phenotyping. Phenotyping has numerous applications such as outcome prediction, clinical trial recruitment, and…

Computation and Language · Computer Science 2018-05-08 Dmitriy Dligach , Timothy Miller

Convolutional neural networks (CNNs) are extensively beneficial for medical image processing. Medical images are plentiful, but there is a lack of annotated data. Transfer learning is used to solve the problem of lack of labeled data and…

Computer Vision and Pattern Recognition · Computer Science 2020-02-11 Sajjad Abbasi , Mohsen Hajabdollahi , Nader Karimi , Shadrokh Samavi , Shahram Shirani

Hierarchical attention networks have recently achieved remarkable performance for document classification in a given language. However, when multilingual document collections are considered, training such models separately for each language…

Computation and Language · Computer Science 2017-09-18 Nikolaos Pappas , Andrei Popescu-Belis

Medical professionals frequently work in a data constrained setting to provide insights across a unique demographic. A few medical observations, for instance, informs the diagnosis and treatment of a patient. This suggests a unique setting…

Computation and Language · Computer Science 2022-12-06 Pankaj Sharma , Imran Qureshi , Minh Tran

Massively multilingual pre-trained language models (MMPLMs) are developed in recent years demonstrating superpowers and the pre-knowledge they acquire for downstream tasks. This work investigates whether MMPLMs can be applied to clinical…

Computation and Language · Computer Science 2023-06-06 Lifeng Han , Gleb Erofeev , Irina Sorokina , Serge Gladkoff , Goran Nenadic

Several biomedical language models have already been developed for clinical language inference. However, these models typically utilize general vocabularies and are trained on relatively small clinical corpora. We sought to evaluate the…

Computation and Language · Computer Science 2022-10-14 Madhumita Sushil , Dana Ludwig , Atul J. Butte , Vivek A. Rudrapatna

Unsupervised domain adaptation has attracted growing research attention on semantic segmentation. However, 1) most existing models cannot be directly applied into lesions transfer of medical images, due to the diverse appearances of same…

Computer Vision and Pattern Recognition · Computer Science 2020-04-27 Jiahua Dong , Yang Cong , Gan Sun , Bineng Zhong , Xiaowei Xu

Cross-lingual transfer, where a high-resource transfer language is used to improve the accuracy of a low-resource task language, is now an invaluable tool for improving performance of natural language processing (NLP) on low-resource…

A common practice in the medical industry is the use of clinical notes, which consist of detailed patient observations. However, electronic health record systems frequently do not contain these observations in a structured format, rendering…

Computation and Language · Computer Science 2023-10-09 Neil Daniel

We present E3C-3.0, a multilingual dataset in the medical domain, comprising clinical cases annotated with diseases and test-result relations. The dataset includes both native texts in five languages (English, French, Italian, Spanish and…

Computation and Language · Computer Science 2025-03-27 Soumitra Ghosh , Begona Altuna , Saeed Farzi , Pietro Ferrazzi , Alberto Lavelli , Giulia Mezzanotte , Manuela Speranza , Bernardo Magnini

This paper investigates Multilingual Medical Question Answering across high-resource (English, Spanish, French, Italian) and low-resource (Basque, Kazakh) languages. We evaluate three types of external evidence sources across models of…

Computation and Language · Computer Science 2026-04-23 Anar Yeginbergen , Maite Oronoz , Rodrigo Agerri

Semantic role labeling is a crucial task in natural language processing, enabling better comprehension of natural language. However, the lack of annotated data in multiple languages has posed a challenge for researchers. To address this, a…

Computation and Language · Computer Science 2024-08-29 Mohammad Ebrahimi , Behrouz Minaei Bidgoli , Nasim Khozouei