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Document-level joint entity and relation extraction is a challenging information extraction problem that requires a unified approach where a single neural network performs four sub-tasks: mention detection, coreference resolution, entity…

Computation and Language · Computer Science 2023-07-25 Witold Kosciukiewicz , Mateusz Wojcik , Tomasz Kajdanowicz , Adam Gonczarek

Biomedical entity linking and event extraction are two crucial tasks to support text understanding and retrieval in the biomedical domain. These two tasks intrinsically benefit each other: entity linking disambiguates the biomedical…

Computation and Language · Computer Science 2023-05-25 Xiaochu Li , Minqian Liu , Zhiyang Xu , Lifu Huang

We present a joint model for entity-level relation extraction from documents. In contrast to other approaches - which focus on local intra-sentence mention pairs and thus require annotations on mention level - our model operates on entity…

Computation and Language · Computer Science 2021-12-06 Markus Eberts , Adrian Ulges

Entity and relation extraction is the necessary step in structuring medical text. However, the feature extraction ability of the bidirectional long short term memory network in the existing model does not achieve the best effect. At the…

Computation and Language · Computer Science 2019-10-23 Kui Xue , Yangming Zhou , Zhiyuan Ma , Tong Ruan , Huanhuan Zhang , Ping He

Relation Extraction is an important task in Information Extraction which deals with identifying semantic relations between entity mentions. Traditionally, relation extraction is carried out after entity extraction in a "pipeline" fashion,…

Computation and Language · Computer Science 2021-03-11 Sachin Pawar , Pushpak Bhattacharyya , Girish K. Palshikar

To minimize the accelerating amount of time invested in the biomedical literature search, numerous approaches for automated knowledge extraction have been proposed. Relation extraction is one such task where semantic relations between the…

Computation and Language · Computer Science 2020-09-22 Shweta Yadav , Srivatsa Ramesh , Sriparna Saha , Asif Ekbal

In practical scenario, relation extraction needs to first identify entity pairs that have relation and then assign a correct relation class. However, the number of non-relation entity pairs in context (negative instances) usually far…

Computation and Language · Computer Science 2019-06-24 Wei Ye , Bo Li , Rui Xie , Zhonghao Sheng , Long Chen , Shikun Zhang

We hypothesize that explicit integration of contextual information into an Multi-task Learning framework would emphasize the significance of context for boosting performance in jointly learning Named Entity Recognition (NER) and Relation…

Computation and Language · Computer Science 2021-02-23 Paul Barry , Sam Henry , Meliha Yetisgen , Bridget McInnes , Ozlem Uzuner

Joint entity and relation extraction is the fundamental task of information extraction, consisting of two subtasks: named entity recognition and relation extraction. However, most existing joint extraction methods suffer from issues of…

Computation and Language · Computer Science 2024-03-28 Wenjun Kong , Yamei Xia

Joint extraction of entities and relations aims to detect entity pairs along with their relations using a single model. Prior work typically solves this task in the extract-then-classify or unified labeling manner. However, these methods…

Computation and Language · Computer Science 2020-02-20 Bowen Yu , Zhenyu Zhang , Xiaobo Shu , Yubin Wang , Tingwen Liu , Bin Wang , Sujian Li

Successful biomedical relation extraction can provide evidence to researchers and clinicians about possible unknown associations between biomedical entities, advancing the current knowledge we have about those entities and their inherent…

Information Retrieval · Computer Science 2020-04-22 Diana Sousa , Francisco M. Couto

Compared to the general news domain, information extraction (IE) from biomedical text requires much broader domain knowledge. However, many previous IE methods do not utilize any external knowledge during inference. Due to the exponential…

Computation and Language · Computer Science 2021-06-02 Tuan Lai , Heng Ji , ChengXiang Zhai , Quan Hung Tran

Understanding the meaning of text often involves reasoning about entities and their relationships. This requires identifying textual mentions of entities, linking them to a canonical concept, and discerning their relationships. These tasks…

Computation and Language · Computer Science 2019-12-04 Trapit Bansal , Pat Verga , Neha Choudhary , Andrew McCallum

State-of-the-art models for joint entity recognition and relation extraction strongly rely on external natural language processing (NLP) tools such as POS (part-of-speech) taggers and dependency parsers. Thus, the performance of such joint…

Computation and Language · Computer Science 2018-12-18 Giannis Bekoulis , Johannes Deleu , Thomas Demeester , Chris Develder

Joint extraction of entities and relations is an important task in information extraction. To tackle this problem, we firstly propose a novel tagging scheme that can convert the joint extraction task to a tagging problem. Then, based on our…

Computation and Language · Computer Science 2017-06-19 Suncong Zheng , Feng Wang , Hongyun Bao , Yuexing Hao , Peng Zhou , Bo Xu

Most work in relation extraction forms a prediction by looking at a short span of text within a single sentence containing a single entity pair mention. This approach often does not consider interactions across mentions, requires redundant…

Computation and Language · Computer Science 2018-03-01 Patrick Verga , Emma Strubell , Andrew McCallum

Due to the exponential growth of biomedical literature, event and relation extraction are important tasks in biomedical text mining. Most work only focus on relation extraction, and detect a single entity pair mention on a short span of…

Computation and Language · Computer Science 2020-05-08 Elaheh ShafieiBavani , Antonio Jimeno Yepes , Xu Zhong , David Martinez Iraola

In this paper, we report our method for the Information Extraction task in 2019 Language and Intelligence Challenge. We incorporate BERT into the multi-head selection framework for joint entity-relation extraction. This model extends…

Computation and Language · Computer Science 2019-09-27 Weipeng Huang , Xingyi Cheng , Taifeng Wang , Wei Chu

Biomedical event extraction is an information extraction task to obtain events from biomedical text, whose targets include the type, the trigger, and the respective arguments involved in an event. Traditional biomedical event extraction…

Computation and Language · Computer Science 2024-03-20 Pengchao Wu , Xuefeng Li , Jinghang Gu , Longhua Qian , Guodong Zhou

An exhaustive study has been conducted to investigate span-based models for the joint entity and relation extraction task. However, these models sample a large number of negative entities and negative relations during the model training,…

Computation and Language · Computer Science 2022-08-19 Bin Ji , Hao Xu , Jie Yu , Shasha Li , Jun Ma , Yuke Ji , Huijun Liu
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