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Graph Neural Networks (GNNs) have led to state-of-the-art performance on a variety of machine learning tasks such as recommendation, node classification and link prediction. Graph neural network models generate node embeddings by merging…

Machine Learning · Computer Science 2020-11-04 Yunpeng Weng , Xu Chen , Liang Chen , Wei Liu

A large-scale knowledge graph enhances reproducibility in biomedical data discovery by providing a standardized, integrated framework that ensures consistent interpretation across diverse datasets. It improves generalizability by connecting…

Methodology · Statistics 2024-10-11 Suqi Liu , Tianxi Cai , Xiaoou Li

Graph Neural Networks (GNNs) learn low dimensional representations of nodes by aggregating information from their neighborhood in graphs. However, traditional GNNs suffer from two fundamental shortcomings due to their local ($l$-hop…

Machine Learning · Computer Science 2021-04-28 Kashob Kumar Roy , Amit Roy , A K M Mahbubur Rahman , M Ashraful Amin , Amin Ahsan Ali

The link prediction task on knowledge graphs without explicit negative triples in the training data motivates the usage of rank-based metrics. Here, we review existing rank-based metrics and propose desiderata for improved metrics to…

Machine Learning · Computer Science 2022-04-20 Charles Tapley Hoyt , Max Berrendorf , Mikhail Galkin , Volker Tresp , Benjamin M. Gyori

Modeling of relation pattern is the core focus of previous Knowledge Graph Embedding works, which represents how one entity is related to another semantically by some explicit relation. However, there is a more natural and intuitive…

Computation and Language · Computer Science 2021-10-05 Ren Li , Yanan Cao , Qiannan Zhu , Xiaoxue Li , Fang Fang

Interpretable Multi-Task Learning can be expressed as learning a sparse graph of the task relationship based on the prediction performance of the learned models. Since many natural phenomenon exhibit sparse structures, enforcing sparsity on…

Machine Learning · Computer Science 2020-09-14 Francesco Alesiani , Shujian Yu , Ammar Shaker , Wenzhe Yin

In this work, we propose a novel link prediction model and further boost it by studying graph incompleteness. First, we introduce MPNN-then-SF, an innovative architecture leveraging structural feature (SF) to guide MPNN's representation…

Machine Learning · Computer Science 2024-06-05 Xiyuan Wang , Haotong Yang , Muhan Zhang

While there are a plethora of methods for link prediction in knowledge graphs, state-of-the-art approaches are often black box, obfuscating model reasoning and thereby limiting the ability of users to make informed decisions about model…

Machine Learning · Computer Science 2024-06-05 Niraj Kumar-Singh , Gustavo Polleti , Saee Paliwal , Rachel Hodos-Nkhereanye

Though graph representation learning (GRL) has made significant progress, it is still a challenge to extract and embed the rich topological structure and feature information in an adequate way. Most existing methods focus on local structure…

Machine Learning · Computer Science 2022-12-09 Ruiyi Fang , Liangjian Wen , Zhao Kang , Jianzhuang Liu

Graph Neural Networks (GNNs) have demonstrated remarkable proficiency in modeling data with graph structures, yet recent research reveals their susceptibility to adversarial attacks. Traditional attack methodologies, which rely on…

Machine Learning · Computer Science 2025-06-23 Wenlun Zhang , Enyan Dai , Kentaro Yoshioka

Knowledge graph embedding methods are important for the knowledge graph completion (or link prediction) task. One existing efficient method, PairRE, leverages two separate vectors to model complex relations (i.e., 1-to-N, N-to-1, and…

Artificial Intelligence · Computer Science 2022-10-25 Yizhi Li , Wei Fan , Chao Liu , Chenghua Lin , Jiang Qian

Graph neural networks use relational information as an inductive bias to enhance prediction performance. Not rarely, task-relevant relations are unknown and graph structure learning approaches have been proposed to learn them from data.…

Machine Learning · Computer Science 2025-05-29 Alessandro Manenti , Daniele Zambon , Cesare Alippi

Inductive knowledge graph completion (KGC) aims to infer the missing relation for a set of newly-coming entities that never appeared in the training set. Such a setting is more in line with reality, as real-world KGs are constantly evolving…

Artificial Intelligence · Computer Science 2024-07-23 Qinggang Zhang , Keyu Duan , Junnan Dong , Pai Zheng , Xiao Huang

Spatio-temporal kriging is an important problem in web and social applications, such as Web or Internet of Things, where things (e.g., sensors) connected into a web often come with spatial and temporal properties. It aims to infer knowledge…

Machine Learning · Computer Science 2023-02-07 Chuanpan Zheng , Xiaoliang Fan , Cheng Wang , Jianzhong Qi , Chaochao Chen , Longbiao Chen

Link prediction in complex networks has attracted considerable attention from interdisciplinary research communities, due to its ubiquitous applications in biological networks, social networks, transportation networks, telecommunication…

Social and Information Networks · Computer Science 2020-12-22 Ece C. Mutlu , Toktam A. Oghaz , Amirarsalan Rajabi , Ivan Garibay

Machine learning techniques are gaining attention in the context of intrusion detection due to the increasing amounts of data generated by monitoring tools, as well as the sophistication displayed by attackers in hiding their activity.…

Cryptography and Security · Computer Science 2023-08-25 Josep Soler Garrido , Dominik Dold , Johannes Frank

Knowledge graph embeddings rank among the most successful methods for link prediction in knowledge graphs, i.e., the task of completing an incomplete collection of relational facts. A downside of these models is their strong sensitivity to…

Machine Learning · Statistics 2019-07-03 Robert Bamler , Farnood Salehi , Stephan Mandt

In Human-Robot Interaction (HRI) systems, a challenging task is sharing the representation of the operational environment, fusing symbolic knowledge and perceptions, between users and robots. With the existing HRI pipelines, users can teach…

Robotics · Computer Science 2023-01-18 E. Bartoli , F. Argenziano , V. Suriani , D. Nardi

Many complex natural and cultural phenomena are well modelled by systems of simple interactions between particles. A number of architectures have been developed to articulate this kind of structure, both implicitly and explicitly. We…

Machine Learning · Computer Science 2019-05-22 Ezra Webb , Ben Day , Helena Andres-Terre , Pietro Lió

Since most scientific literature data are unlabeled, this makes unsupervised graph-based semantic representation learning crucial. Therefore, an unsupervised semantic representation learning method of scientific literature based on graph…

Information Retrieval · Computer Science 2023-01-31 Hongrui Gao , Yawen Li , Meiyu Liang , Zeli Guan
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