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The computational demands of modern AI have spurred interest in optical neural networks (ONNs) which offer the potential benefits of increased speed and lower power consumption. However, current ONNs face various challenges,most…

Neural and Evolutionary Computing · Computer Science 2024-01-29 Xiansong Meng , Deming Kong , Kwangwoong Kim , Qiuchi Li , Po Dong , Ingemar J. Cox , Christina Lioma , Hao Hu

Molecular dynamics simulations can generate atomically detailed trajectories of complex systems, but analyzing these dynamics can be challenging when systems lack well-established quantitative descriptors (features). Graph neural networks…

Machine Learning · Computer Science 2025-12-09 Zihan Pengmei , Spencer C. Guo , Chatipat Lorpaiboon , Aaron R. Dinner

Although electrostatics can be incorporated into machine-learned interatomic potentials, existing approaches are computationally very demanding, limiting large-scale, long-time simulations of electrostatics-driven phenomena such as…

For millimeter wave (mmWave) massive multiple-input multiple-output (MIMO) systems, hybrid processing architecture is essential to significantly reduce the complexity and cost but is quite challenging to be jointly optimized over the…

Signal Processing · Electrical Eng. & Systems 2020-06-08 Peihao Dong , Hua Zhang , Geoffrey Ye Li

We present design and implementation of a novel neural network potential (NNP) and its combination with an electrostatic embedding scheme, commonly used within the context of hybrid quantum-mechanical/molecular-mechanical (QM/MM)…

Chemical Physics · Physics 2025-08-15 Felix Pultar , Moritz Thuerlemann , Igor Gordiy , Eva Doloszeski , Sereina Riniker

Spiking neural networks excel at event-driven sensing. Yet, maintaining task-relevant context over long timescales both algorithmically and in hardware, while respecting both tight energy and memory budgets, remains a core challenge in the…

Neural and Evolutionary Computing · Computer Science 2026-05-05 Pengfei Sun , Zhe Su , Jascha Achterberg , Giacomo Indiveri , Dan F. M. Goodman , Danyal Akarca

We introduce the Hierarchically Interacting Particle Neural Network (HIP-NN) to model molecular properties from datasets of quantum calculations. Inspired by a many-body expansion, HIP-NN decomposes properties, such as energy, as a sum over…

Machine Learning · Statistics 2018-04-04 Nicholas Lubbers , Justin S. Smith , Kipton Barros

Deep Neural Networks (DNNs) have revolutionized many aspects of our lives. The use of DNNs is becoming ubiquitous including in softwares for image recognition, speech recognition, speech synthesis, language translation, to name a few. he…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-18 Sanket Tavarageri , Alexander Heinecke , Sasikanth Avancha , Gagandeep Goyal , Ramakrishna Upadrasta , Bharat Kaul

In molecular simulations, neural network force fields aim at achieving \emph{ab initio} accuracy with reduced computational cost. This work introduces enhancements to the Deep Potential network architecture, integrating a message-passing…

Computational Physics · Physics 2024-04-09 Ruiqi Gao , Yifan Li , Roberto Car

Simulating solute transport in heterogeneous porous media poses computational challenges due to the high-resolution meshing required for traditional solvers. To overcome these challenges, this study explores a mesh-free method based on deep…

Machine Learning · Computer Science 2023-12-27 Salah A Faroughi , Ramin Soltanmohammad , Pingki Datta , Seyed Kourosh Mahjour , Shirko Faroughi

Molecular dynamics (MD) simulation is one of the past decade's most important tools for enabling biology scientists and researchers to explore human health and diseases. However, due to the computation complexity of the MD algorithm, it…

Computational Physics · Physics 2016-11-15 Jason Cong , Zhenman Fang , Hassan Kianinejad , Peng Wei

All-atom molecular simulations offer detailed insights into macromolecular phenomena, but their substantial computational cost hinders the exploration of complex biological processes. We introduce Advanced Machine-learning Atomic…

Biomolecules · Quantitative Biology 2024-11-12 Antonio Mirarchi , Raul P. Pelaez , Guillem Simeon , Gianni De Fabritiis

Hardware accelerations of deep learning systems have been extensively investigated in industry and academia. The aim of this paper is to achieve ultra-high energy efficiency and performance for hardware implementations of deep neural…

Machine Learning · Computer Science 2018-02-20 Yanzhi Wang , Caiwen Ding , Zhe Li , Geng Yuan , Siyu Liao , Xiaolong Ma , Bo Yuan , Xuehai Qian , Jian Tang , Qinru Qiu , Xue Lin

Simulations of biological macromolecules play an important role in understanding the physical basis of a number of complex processes such as protein folding. Even with increasing computational power and evolution of specialized…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-09-18 Hyungro Lee , Heng Ma , Matteo Turilli , Debsindhu Bhowmik , Shantenu Jha , Arvind Ramanathan

Using a Deep Neuronal Network model (DNN) trained on the large ANI-1 data set of small organic molecules, we propose a transferable density-free many-body dispersion model (DNN-MBD). The DNN strategy bypasses the explicit Hirshfeld…

As Deep Neural Networks (DNNs) grow in size and complexity, they often exceed the memory capacity of a single accelerator, necessitating the sharding of model parameters across multiple accelerators. Pipeline parallelism is a commonly used…

Machine Learning · Computer Science 2024-05-29 Christopher Rae , Joseph K. L. Lee , James Richings

Spiking Neural Networks (SNNs) offer a promising and energy-efficient alternative to conventional neural networks, thanks to their sparse binary activation. However, they face challenges regarding memory and computation overhead due to…

Neural and Evolutionary Computing · Computer Science 2026-01-06 Donghyun Lee , Abhishek Moitra , Youngeun Kim , Ruokai Yin , Priyadarshini Panda

Scaling deep neural network (DNN) training to more devices can reduce time-to-solution. However, it is impractical for users with limited computing resources. FOSI, as a hybrid order optimizer, converges faster than conventional optimizers…

Machine Learning · Computer Science 2025-08-05 Shunxian Gu , Chaoqun You , Bangbang Ren , Lailong Luo , Junxu Xia , Deke Guo

Large-scale foundation models, including neural network interatomic potentials (NIPs) in computational materials science, have demonstrated significant potential. However, despite their success in accelerating atomistic simulations, NIPs…

Materials Science · Physics 2025-06-24 So Yeon Kim , Yang Jeong Park , Ju Li

The study of plasticity in spiking neural networks is an active area of research. However, simulations that involve complex plasticity rules, dense connectivity/high synapse counts, complex neuron morphologies, or extended simulation times…

Neural and Evolutionary Computing · Computer Science 2024-12-05 Philipp Spilger , Eric Müller , Johannes Schemmel
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