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High-performance scientific simulations, important for comprehension of complex systems, encounter computational challenges especially when exploring extensive parameter spaces. There has been an increasing interest in developing deep…

Machine Learning · Computer Science 2024-07-15 Pradeep Bajracharya , Javier Quetzalcóatl Toledo-Marín , Geoffrey Fox , Shantenu Jha , Linwei Wang

Deep Learning (DL) has advanced various fields by extracting complex patterns from large datasets. However, the computational demands of DL models pose environmental and resource challenges. Deep shift neural networks (DSNNs) offer a…

Machine Learning · Computer Science 2024-04-05 Leona Hennig , Tanja Tornede , Marius Lindauer

State-of-the-art AI deep potentials provide ab initio-quality results, but at a fraction of the computational cost of first-principles quantum mechanical calculations, such as density functional theory. In this work, we bring AI deep…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-03 Andong Hu , Luca Pennati , Stefano Markidis , Ivy Peng

With the rapid advance of Machine Learning techniques and the deep increase of availability of scientific data, data-driven approaches have started to become progressively popular across science, causing a fundamental shift in the…

Numerical Analysis · Mathematics 2023-06-06 Giulia Bertaglia

Coupled multiphysics simulations for high-dimensional, large-scale problems can be prohibitively expensive due to their computational demands. This article presents a novel framework integrating a deep operator network (DeepONet) with the…

Computational Engineering, Finance, and Science · Computer Science 2025-09-03 Fouad M. Amin , Diab W. Abueidda , Panos Pantidis , Mostafa E. Mobasher

Machine learning potentials have achieved great success in accelerating atomistic simulations. Many of them relying on atom-centered local descriptors are natural for parallelization. More recent message passing neural network (MPNN) models…

Chemical Physics · Physics 2025-06-10 Junfan Xia , Bin Jiang

Spiking Neural Networks (SNNs) operate with asynchronous discrete events (or spikes) which can potentially lead to higher energy-efficiency in neuromorphic hardware implementations. Many works have shown that an SNN for inference can be…

Machine Learning · Computer Science 2020-05-06 Nitin Rathi , Gopalakrishnan Srinivasan , Priyadarshini Panda , Kaushik Roy

Hypergraphs serve as an effective model for depicting complex connections in various real-world scenarios, from social to biological networks. The development of Hypergraph Neural Networks (HGNNs) has emerged as a valuable method to manage…

Machine Learning · Computer Science 2024-06-17 Shuai Wang , David W. Zhang , Jia-Hong Huang , Stevan Rudinac , Monika Kackovic , Nachoem Wijnberg , Marcel Worring

Deep neural networks (DNN) have been used successfully in many scientific problems for their high prediction accuracy, but their application to genetic studies remains challenging due to their poor interpretability. In this paper, we…

Machine Learning · Computer Science 2021-10-01 Peyman H. Kassani , Fred Lu , Yann Le Guen , Zihuai He

Photoplethysmography (PPG)-based blood pressure (BP) estimation is a challenging task, particularly on resource-constrained wearable devices. However, fully on-board processing is desirable to ensure user data confidentiality. Recent deep…

This study presents two different machine learning approaches for the modeling of hydrodynamic force on particles in a particle-laden multiphase flow. Results from particle-resolved direct numerical simulations (PR-DNS) of flow over a…

Fluid Dynamics · Physics 2020-07-15 S. Balachandar , W. C. Moore , G. Akiki , K. Liu

Deep Learning is able to solve a plethora of once impossible problems. However, they are vulnerable to input adversarial attacks preventing them from being autonomously deployed in critical applications. Several algorithm-centered works…

Cryptography and Security · Computer Science 2020-11-30 Abhishek Moitra , Priyadarshini Panda

Implicit solvent models are widely used to decrease the number of solvent degrees of freedom and enable the calculation of solvation energetics without water molecules. However, its accuracy often falls short compared to explicit models.…

Chemical Physics · Physics 2026-05-15 Rishabh Dey , Salvina Sharipova , Konstantin Popov

We have developed molecular dynamics codes for a short-range interaction potential that adopt both the flat-MPI and MPI/OpenMP hybrid parallelizations on the basis of a full domain decomposition strategy. Benchmark simulations involving up…

Computational Physics · Physics 2013-11-28 Hiroshi Watanabe , Masaru Suzuki , Nobuyasu Ito

While molecular dynamics (MD) is a very useful computational method for atomistic simulations, modeling the interatomic interactions for reliable MD simulations of real materials has been a long-standing challenge. In 2007, Behler and…

Materials Science · Physics 2025-06-11 Ling Tang , Weiyi Xia , Gayatri Viswanathan , Ernesto Soto , Kirill Kovnir , Cai-Zhuang Wang

The proliferation of machine learning services in the last few years has raised data privacy concerns. Homomorphic encryption (HE) enables inference using encrypted data but it incurs 100x-10,000x memory and runtime overheads. Secure deep…

We introduce a high-throughput neural network accelerator that embeds most network layers directly in hardware, minimizing data transfer and memory usage while preserving a degree of flexibility via a small neural processing unit for the…

Hardware Architecture · Computer Science 2025-12-16 Jonathan Herbst , Michael Pellauer , Sherief Reda

The training process of neural networks is known to be time-consuming, and having a deep architecture only aggravates the issue. This process consists mostly of matrix operations, among which matrix multiplication is the bottleneck. Several…

Machine Learning · Computer Science 2025-06-17 Sana Ebrahimi , Rishi Advani , Abolfazl Asudeh

Deep Neural Networks (DNNs) have emerged as the core enabler of many major applications on mobile devices. To achieve high accuracy, DNN models have become increasingly deep with hundreds or even thousands of operator layers, leading to…

Machine Learning · Computer Science 2021-12-02 Wei Niu , Jiexiong Guan , Yanzhi Wang , Gagan Agrawal , Bin Ren

In this work, we present a general purpose deep neural network package for representing energies, forces, dipole moments, and polarizabilities of atomistic systems. This so-called recursively embedded atom neural network model takes both…

Chemical Physics · Physics 2022-04-06 Yaolong Zhang , Junfan Xia , Bin Jiang