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Reproducibility should be a cornerstone of science as it enables validation and reuse. In recent years, the scientific community and the general public became increasingly aware of the reproducibility crisis, i.e. the wide-spread inability…

Human-Computer Interaction · Computer Science 2020-12-07 Sebastian Stefan Feger

Many research groups aspire to make data and code FAIR and reproducible, yet struggle because the data and code life cycles are disconnected, executable environments are often missing from published work, and technical skill requirements…

Ensuring the reproducibility of scientific work is crucial as it allows the consistent verification of scientific claims and facilitates the advancement of knowledge by providing a reliable foundation for future research. However,…

Software Engineering · Computer Science 2025-04-14 Lázaro Costa , Susana Barbosa , Jácome Cunha

High-quality, "rich" metadata are essential for making research data findable, interoperable, and reusable. The Center for Expanded Data Annotation and Retrieval (CEDAR) has long addressed this need by providing tools to design…

Digital Libraries · Computer Science 2025-08-05 Martin J. O'Connor , Marcos Martinez-Romero , Attila L. Egyedi , Mete U. Akdogan , Michael V. Dorf , Mark A. Musen

As part of the investigation done by the IEEE Standards Association P2957 Working Group, called Big Data Governance and Metadata Management, the use of persistent identifiers (PIDs) is looked at for tackling the problem of reproducible…

Databases · Computer Science 2022-09-22 Wen Ting Maria Tu , Stephen Makonin

Scientists strive to make their datasets available in open repositories, with the goal that they be findable, accessible, interoperable, and reusable (FAIR). Although it is hard for most investigators to remember all the guiding principles…

Digital Libraries · Computer Science 2025-07-31 Mark A. Musen , Martin J. O'Connor , Josef Hardi , Marcos Martinez-Romero

Modern workflows run on increasingly heterogeneous computing architectures and with this heterogeneity comes additional complexity. We aim to apply the FAIR principles for research reproducibility by developing software to collect metadata…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-19 Polina Shpilker , Line Pouchard

Robot behavior is often validated through simulation-based testing, yet the replicability of such campaigns depends critically on transparent documentation of how tests are configured, executed, and post-processed. We argue that data…

Robotics · Computer Science 2026-05-29 Argentina Ortega , Samuel Wiest , Frederik Pasch , Nico Hochgeschwender

In order to make results of computational scientific research findable, accessible, interoperable and re-usable, it is necessary to decorate them with standardised metadata. However, there are a number of technical and practical challenges…

Over the past decade alongside increased focus on computational reproducibility significant efforts have been made to define reproducibility. However, these definitions provide a textual description rather than a framework. The community…

Computational Engineering, Finance, and Science · Computer Science 2026-01-06 Meznah Aloqalaa , Stian Soiland-Reyes , Carole Goble

The Center for Expanded Data Annotation and Retrieval (CEDAR) aims to revolutionize the way that metadata describing scientific experiments are authored. The software we have developed--the CEDAR Workbench--is a suite of Web-based tools and…

This paper proposes an interactive repository type for research software metadata which measures and documents software sustainability by accumulating metadata, and computing sustainability metrics over them. Such a repository would help to…

Software Engineering · Computer Science 2016-08-18 Stephan Druskat

Managing the data and metadata during the active development phase of an experimental project presents a significant challenge, particularly in collaborative research. This phase is frequently overlooked in Data Management Plans included in…

Information Retrieval · Computer Science 2026-02-24 William Gaultier , Andrea Lodetti , Ian Coghill , David Colliaux , Maximilian Fleck , Alienor Lahlou

A common concern in experimental research is the auditability and reproducibility of experiments. Experiments are usually designed, provisioned, managed, and analyzed by diverse teams of specialists (e.g., researchers, technicians and…

Artificial Intelligence methods are powerful tools for biological image analysis and processing. High-quality annotated images are key to training and developing new methods, but access to such data is often hindered by the lack of…

Information retrieval systems have been evaluated using the Cranfield paradigm for many years. This paradigm allows a systematic, fair, and reproducible evaluation of different retrieval methods in fixed experimental environments. However,…

Information Retrieval · Computer Science 2024-07-02 Jüri Keller , Timo Breuer , Philipp Schaer

During the ESCAPE project, a pilot analysis facility was developed with a bottom-up approach, in collaboration with all the project partners. As a result, the CERN Virtual Research Environment (VRE) initiative proposes a workspace that…

Replicability and reproducibility of experimental results are primary concerns in all the areas of science and IR is not an exception. Besides the problem of moving the field towards more reproducible experimental practices and protocols,…

Information Retrieval · Computer Science 2020-10-27 Timo Breuer , Nicola Ferro , Norbert Fuhr , Maria Maistro , Tetsuya Sakai , Philipp Schaer , Ian Soboroff

Ascertaining the feasibility of independent falsification or repetition of published results is vital to the scientific process, and replication or reproduction experiments are routinely performed in many disciplines. Unfortunately, such…

Databases · Computer Science 2020-09-11 Dimitri Braininger , Wolfgang Mauerer , Stefanie Scherzinger