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Synthetic DNA can in principle be used for the archival storage of arbitrary data. Because errors are introduced during DNA synthesis, storage, and sequencing, an error-correcting code (ECC) is necessary for error-free recovery of the data.…

Quantitative Methods · Quantitative Biology 2018-12-05 William H. Press , John A. Hawkins

Due to individual unreliable commodity components, failures are common in large-scale distributed storage systems. Erasure codes are widely deployed in practical storage systems to provide fault tolerance with low storage overhead. However,…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-04-15 Liangliang Xu , Min Lyu , Zhipeng Li , Yongkun Li , Yinlong Xu

The ever growing demands of embedded systems to satisfy high computing performance and cost efficiency lead to the trend of using commercial off-the-shelf hardware. However, due to their highly integrated design they are becoming…

Software Engineering · Computer Science 2015-11-24 Andrea Höller , Tobias Rauter , Johannes Iber , Georg Macher , Christian Kreiner

Redundancy is related to the amount of functionality that the structure can sustain in the worst-case scenario of structural degradation. This paper proposes a widely-applicable concept of redundancy optimization of finite-dimensional…

Optimization and Control · Mathematics 2017-08-22 Yoshihiro Kanno

Because of its high data density and longevity, DNA is emerging as a promising candidate for satisfying increasing data storage needs. Compared to conventional storage media, however, data stored in DNA is subject to a wider range of errors…

Information Theory · Computer Science 2020-08-20 Yuanyuan Tang , Farzad Farnoud

Code completion is one of the most widely used features of modern integrated development environments (IDEs). While deep learning has made significant progress in the statistical prediction of source code, state-of-the-art neural network…

Software Engineering · Computer Science 2021-03-17 Alexey Svyatkovskiy , Sebastian Lee , Anna Hadjitofi , Maik Riechert , Juliana Franco , Miltiadis Allamanis

Recently, DNA storage has surfaced as a promising alternative for data storage, presenting notable benefits in terms of storage capacity, cost-effectiveness in maintenance, and the capability for parallel replication. Mathematically, the…

Information Theory · Computer Science 2024-01-31 Yi Lu , Yun Ma , Chenghao Li , Xin Zhang , Guangxiang Si

This paper presents a novel method to identify and insert redundant logic into a combinational circuit to improve its fault tolerance without having to replicate the entire circuit as is the case with conventional redundancy techniques. In…

Hardware Architecture · Computer Science 2017-07-24 P Balasubramanian , R T Naayagi

Polar codes asymptotically achieve the symmetric capacity of memoryless channels, yet their error-correcting performance under successive-cancellation (SC) decoding for short and moderate length codes is worse than that of other modern…

Information Theory · Computer Science 2015-12-25 Gabi Sarkis , Pascal Giard , Alexander Vardy , Claude Thibeault , Warren J. Gross

Reliability is an important requirement for both communication and storage systems. Due to continuous scale down of technology multiple adjacent bits error probability increases. The data may be corrupted due soft errors. Error correction…

Hardware Architecture · Computer Science 2020-02-19 Sayan Tripathi , Jhilam Jana , Jaydeb Bhaumik

In this paper we study codes for correcting deletable errors in binary words, where each bit is either retained, substituted, erased or deleted and the total number of errors is much smaller compared to the length of the codeword. We…

Information Theory · Computer Science 2021-03-02 Ghurumuruhan Ganesan

The concept of $k$-defective clique, a relaxation of clique by allowing up-to $k$ missing edges, has been receiving increasing interests recently. Although the problem of finding the maximum $k$-defective clique is NP-hard, several…

Data Structures and Algorithms · Computer Science 2024-03-13 Lijun Chang

Arising disruptive memory technologies continuously make their way into the memory hierarchy at various levels. Racetrack memory is one promising candidate for future memory due to the overall low energy consumption, access latency and high…

Hardware Architecture · Computer Science 2025-03-03 Christian Hakert , Shuo-Han Chen , Kay Heider , Roland Kühn , Yun-Chih Chen , Jens Teubner , Jian-Jia Chen

We study the application of polar codes in deletion channels by analyzing the cascade of a binary erasure channel (BEC) and a deletion channel. We show how polar codes can be used effectively on a BEC with a single deletion, and propose a…

Information Theory · Computer Science 2017-01-10 Eldho K. Thomas , Vincent Y. F. Tan , Alexander Vardy , Mehul Motani

Recently, there have been original attempts to use the concept of "code similarity" in program repair, suggesting that similarity analysis has an important role in the repair process. However, there is no dedicated work to characterize and…

Software Engineering · Computer Science 2019-05-17 Zimin Chen , Martin Monperrus

To help reliability of SSD arrays, Redundant Array of Independent Disks (RAID) are commonly employed. However, the conventional reliability models of HDD RAID cannot be applied to SSD arrays, as the nature of failures in SSDs are different…

Performance · Computer Science 2021-12-24 Mostafa Kishani , Saba Ahmadian , Hossein Asadi

We propose $(k,k')$ stabilizing codes, which is a type of delayless error correction codes that are useful for control over networks with erasures. For each input symbol, $k$ output symbols are generated by the stabilizing code. Receiving…

Information Theory · Computer Science 2021-12-23 Jan Østergaard

Flash memory is a non-volatile computer memory comprising blocks of cells, wherein each cell can take on q different values or levels. While increasing the cell level is easy, reducing the level of a cell can be accomplished only by erasing…

Information Theory · Computer Science 2012-10-30 Eitan Yaakobi , Hessam Mahdavifar , Paul H. Siegel , Alexander Vardy , Jack K. Wolf

We generalize the notion of the stopping redundancy in order to study the smallest size of a trapping set in Tanner graphs of linear block codes. In this context, we introduce the notion of the trapping redundancy of a code, which…

Information Theory · Computer Science 2016-11-17 Stefan Laendner , Thorsten Hehn , Olgica Milenkovic , Johannes B. Huber

Motivated by the sequence reconstruction problem from traces in DNA-based storage, we consider the problem of designing codes for the deletion channel when multiple observations (or traces) are available to the decoder. We propose simple…

Information Theory · Computer Science 2019-06-26 Mahed Abroshan , Ramji Venkataramanan , Lara Dolecek , Albert Guillén i Fàbregas