Related papers: Building a Relation Extraction Baseline for Gene-D…
Extracting relations across large text spans has been relatively underexplored in NLP, but it is particularly important for high-value domains such as biomedicine, where obtaining high recall of the latest findings is crucial for practical…
Analysing the generalisation capabilities of relation extraction (RE) models is crucial for assessing whether they learn robust relational patterns or rely on spurious correlations. Our cross-dataset experiments find that RE models struggle…
This paper explores how the Distantly Supervised Relation Extraction (DS-RE) can benefit from the use of a Universal Graph (UG), the combination of a Knowledge Graph (KG) and a large-scale text collection. A straightforward extension of a…
Reproducibility is one of the key characteristics of good science, but hard to achieve for experimental disciplines like Internet measurements and networked systems. This guide provides advice to researchers, particularly those new to the…
Reproducibility should be a cornerstone of science as it enables validation and reuse. In recent years, the scientific community and the general public became increasingly aware of the reproducibility crisis, i.e. the wide-spread inability…
Document-level relation extraction aims to extract relations among entities within a document. Compared with its sentence-level counterpart, Document-level relation extraction requires inference over multiple sentences to extract complex…
Relation extraction (RE) aims to predict a relation between a subject and an object in a sentence, while knowledge graph link prediction (KGLP) aims to predict a set of objects, O, given a subject and a relation from a knowledge graph.…
Relation Extraction (RE) has attracted increasing attention, but current RE evaluation is limited to in-domain evaluation setups. Little is known on how well a RE system fares in challenging, but realistic out-of-distribution evaluation…
This is the final report on reproducibility@xsede, a one-day workshop held in conjunction with XSEDE14, the annual conference of the Extreme Science and Engineering Discovery Environment (XSEDE). The workshop's discussion-oriented agenda…
Most work in relation extraction forms a prediction by looking at a short span of text within a single sentence containing a single entity pair mention. This approach often does not consider interactions across mentions, requires redundant…
The vast amount of biomedical information available today presents a significant challenge for investigators seeking to digest, process, and understand these findings effectively. Large Language Models (LLMs) have emerged as powerful tools…
Background. Reproducibility is essential to the scientific method, but reproduction is often a laborious task. Recent works have attempted to automate this process and relieve researchers of this workload. However, due to varying…
Preventable adverse drug reactions as a result of medical errors present a growing concern in modern medicine. As drug-drug interactions (DDIs) may cause adverse reactions, being able to extracting DDIs from drug labels into…
We present GeSERA, an open-source improved version of SERA for evaluating automatic extractive and abstractive summaries from the general domain. SERA is based on a search engine that compares candidate and reference summaries (called…
Document-level relation extraction is a complex human process that requires logical inference to extract relationships between named entities in text. Existing approaches use graph-based neural models with words as nodes and edges as…
In this work, we present a Web-based annotation tool `Relation Triplets Extractor' \footnote{https://abera87.github.io/annotate/} (RTE) for annotating relation triplets from the text. Relation extraction is an important task for extracting…
Relation Extraction (RE) is a fundamental task of information extraction, which has attracted a large amount of research attention. Previous studies focus on extracting the relations within a sentence or document, while currently…
Automatic relation extraction (RE) for types of interest is of great importance for interpreting massive text corpora in an efficient manner. Traditional RE models have heavily relied on human-annotated corpus for training, which can be…
Document-level joint entity and relation extraction is a challenging information extraction problem that requires a unified approach where a single neural network performs four sub-tasks: mention detection, coreference resolution, entity…
Retrieval-augmented generation (RAG) is a powerful technique that enhances downstream task execution by retrieving additional information, such as knowledge, skills, and tools from external sources. Graph, by its intrinsic "nodes connected…