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Vision transformers are effective deep learning models for vision tasks, including medical image segmentation. However, they lack efficiency and translational invariance, unlike convolutional neural networks (CNNs). To model long-range…

Image and Video Processing · Electrical Eng. & Systems 2023-08-15 Liam Chalcroft , Ruben Lourenço Pereira , Mikael Brudfors , Andrew S. Kayser , Mark D'Esposito , Cathy J. Price , Ioannis Pappas , John Ashburner

In the isointense stage, the accurate volumetric image segmentation is a challenging task due to the low contrast between tissues. In this paper, we propose a novel very deep network architecture based on a densely convolutional network for…

Computer Vision and Pattern Recognition · Computer Science 2017-09-15 Toan Duc Bui , Jitae Shin , Taesup Moon

We propose a novel, conceptually simple and general framework for instance segmentation on 3D point clouds. Our method, called 3D-BoNet, follows the simple design philosophy of per-point multilayer perceptrons (MLPs). The framework directly…

Computer Vision and Pattern Recognition · Computer Science 2019-09-06 Bo Yang , Jianan Wang , Ronald Clark , Qingyong Hu , Sen Wang , Andrew Markham , Niki Trigoni

Depth completion plays a vital role in 3D perception systems, especially in scenarios where sparse depth data must be densified for tasks such as autonomous driving, robotics, and augmented reality. While many existing approaches rely on…

Computer Vision and Pattern Recognition · Computer Science 2025-12-10 Abdul Haseeb Nizamani , Dandi Zhou , Xinhai Sun

Multi-instance video object segmentation is to segment specific instances throughout a video sequence in pixel level, given only an annotated first frame. In this paper, we implement an effective fully convolutional networks with U-Net…

Computer Vision and Pattern Recognition · Computer Science 2019-05-21 Heguang Liu , Jingle Jiang

Cell segmentation is a major bottleneck in extracting quantitative single-cell information from microscopy data. The challenge is exasperated in the setting of microstructured environments. While deep learning approaches have proven useful…

Quantitative Methods · Quantitative Biology 2021-01-08 Tim Prangemeier , Christian Wildner , André O. Françani , Christoph Reich , Heinz Koeppl

Cell image segmentation is usually implemented using fully supervised deep learning methods, which heavily rely on extensive annotated training data. Yet, due to the complexity of cell morphology and the requirement for specialized…

Computer Vision and Pattern Recognition · Computer Science 2024-05-06 Yu Zhu , Qiang Yang , Li Xu

The Medico: Multimedia Task 2020 focuses on developing an efficient and accurate computer-aided diagnosis system for automatic segmentation [3]. We participate in task 1, Polyps segmentation task, which is to develop algorithms for…

Image and Video Processing · Electrical Eng. & Systems 2021-06-01 Quoc-Huy Trinh , Minh-Van Nguyen , Thiet-Gia Huynh , Minh-Triet Tran

Gliomas are brain tumor types that have a high mortality rate which means early and accurate diagnosis is important for therapeutic intervention for the tumors. To address this difficulty, the proposed research will develop a hybrid deep…

Computer Vision and Pattern Recognition · Computer Science 2025-11-27 Pandiyaraju V , Sreya Mynampati , Abishek Karthik , Poovarasan L , D. Saraswathi

Segmentation of organs of interest in 3D medical images is necessary for accurate diagnosis and longitudinal studies. Though recent advances using deep learning have shown success for many segmentation tasks, large datasets are required for…

Computer Vision and Pattern Recognition · Computer Science 2020-11-20 Soopil Kim , Sion An , Philip Chikontwe , Sang Hyun Park

Identify the cells' nuclei is the important point for most medical analyses. To assist doctors finding the accurate cell' nuclei location automatically is highly demanded in the clinical practice. Recently, fully convolutional neural…

Computer Vision and Pattern Recognition · Computer Science 2019-11-25 Tianyang Zhang , Rui Ma

We present a bottom-up approach for the task of object instance segmentation using a single-shot model. The proposed model employs a fully convolutional network which is trained to predict class-wise segmentation masks as well as the…

Computer Vision and Pattern Recognition · Computer Science 2018-07-23 Jacob Richeimer , Jonathan Mitchell

We tackle the problem of learning an implicit scene representation for 3D instance segmentation from a sequence of posed RGB images. Towards this, we introduce 3DIML, a novel framework that efficiently learns a neural label field which can…

Computer Vision and Pattern Recognition · Computer Science 2024-11-26 George Tang , Krishna Murthy Jatavallabhula , Antonio Torralba

We propose a novel Attentional Scale Sequence Fusion based You Only Look Once (YOLO) framework (ASF-YOLO) which combines spatial and scale features for accurate and fast cell instance segmentation. Built on the YOLO segmentation framework,…

Computer Vision and Pattern Recognition · Computer Science 2024-05-13 Ming Kang , Chee-Ming Ting , Fung Fung Ting , Raphaël C. -W. Phan

A major challenge in brain tumor treatment planning and quantitative evaluation is determination of the tumor extent. The noninvasive magnetic resonance imaging (MRI) technique has emerged as a front-line diagnostic tool for brain tumors…

Computer Vision and Pattern Recognition · Computer Science 2017-06-06 Hao Dong , Guang Yang , Fangde Liu , Yuanhan Mo , Yike Guo

3D image segmentation plays an important role in biomedical image analysis. Many 2D and 3D deep learning models have achieved state-of-the-art segmentation performance on 3D biomedical image datasets. Yet, 2D and 3D models have their own…

Computer Vision and Pattern Recognition · Computer Science 2018-12-11 Hao Zheng , Yizhe Zhang , Lin Yang , Peixian Liang , Zhuo Zhao , Chaoli Wang , Danny Z. Chen

In the realm of medical diagnostics, rapid advancements in Artificial Intelligence (AI) have significantly yielded remarkable improvements in brain tumor segmentation. Encoder-Decoder architectures, such as U-Net, have played a…

Computer Vision and Pattern Recognition · Computer Science 2025-10-23 Eyad Gad , Seif Soliman , M. Saeed Darweesh

Melanoma is one of the most serious skin cancers that can occur in any part of the human skin. Early diagnosis of melanoma lesions will significantly increase their chances of being cured. Improving melanoma segmentation will help doctors…

Image and Video Processing · Electrical Eng. & Systems 2023-01-12 Mohamad Taghizadeh , Karim Mohammadi

Microglia are important cells in the brain, and their shape can tell us a lot about brain health. In this project, I test three different tools for finding the center points of microglia in 3D microscope images. The tools include ilastik,…

Computer Vision and Pattern Recognition · Computer Science 2025-05-09 Youjia Zhang

In this study, we proposed and validated a multi-atlas guided 3D fully convolutional network (FCN) ensemble model (M-FCN) for segmenting brain regions of interest (ROIs) from structural magnetic resonance images (MRIs). One major limitation…

Computer Vision and Pattern Recognition · Computer Science 2023-08-11 Jiong Wu , Xiaoying Tang