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A joint image reconstruction and segmentation approach based on disentangled representation learning was trained to enable cardiac cine MR imaging in real-time and under free-breathing. An exploratory feasibility study tested the proposed…

Deconvolution microscopy has been extensively used to improve the resolution of the widefield fluorescent microscopy. Conventional approaches, which usually require the point spread function (PSF) measurement or blind estimation, are…

Machine Learning · Computer Science 2019-04-08 Sungjun Lim , Sang-Eun Lee , Sunghoe Chang , Jong Chul Ye

Segmenting anatomical structures in medical images has been successfully addressed with deep learning methods for a range of applications. However, this success is heavily dependent on the quality of the image that is being segmented. A…

Image and Video Processing · Electrical Eng. & Systems 2020-07-06 Ilkay Oksuz , James R. Clough , Bram Ruijsink , Esther Puyol Anton , Aurelien Bustin , Gastao Cruz , Claudia Prieto , Andrew P. King , Julia A. Schnabel

We propose a fully automated algorithm based on a deep learning framework enabling screening of a coronary computed tomography angiography (CCTA) examination for confident detection of the presence or absence of coronary artery…

Image and Video Processing · Electrical Eng. & Systems 2020-06-09 Sema Candemir , Richard D. White , Mutlu Demirer , Vikash Gupta , Matthew T. Bigelow , Luciano M. Prevedello , Barbaros S. Erdal

In Europe the 20% of the CT scans cover the thoracic region. The acquired images contain information about the cardiovascular system that often remains latent due to the lack of contrast in the cardiac area. On the other hand, the contrast…

Computer Vision and Pattern Recognition · Computer Science 2018-07-06 Gianmarco Santini , Lorena M. Zumbo , Nicola Martini , Gabriele Valvano , Andrea Leo , Andrea Ripoli , Francesco Avogliero , Dante Chiappino , Daniele Della Latta

Atlas-based approaches allow high-quality, patient-specific shape reconstructions of cardiac anatomy from sparse and/or noisy data such as point clouds. However, these methods are mainly prior-driven, so the impact of uncertainty can be…

Image and Video Processing · Electrical Eng. & Systems 2026-05-11 Jan Verhülsdonk , Thomas Grandits , Francisco Sahli Costabal , Thomas Beiert , Simone Pezzuto , Alexander Effland

Alterations in the geometry and function of the heart define well-established causes of cardiovascular disease. However, current approaches to the diagnosis of cardiovascular diseases often rely on subjective human assessment as well as…

Computer Vision and Pattern Recognition · Computer Science 2018-07-19 Carlo Biffi , Ozan Oktay , Giacomo Tarroni , Wenjia Bai , Antonio De Marvao , Georgia Doumou , Martin Rajchl , Reem Bedair , Sanjay Prasad , Stuart Cook , Declan O'Regan , Daniel Rueckert

In multi-photon microscopy (MPM), a recent in-vivo fluorescence microscopy system, the task of image restoration can be decomposed into two interlinked inverse problems: firstly, the characterization of the Point Spread Function (PSF) and…

Image and Video Processing · Electrical Eng. & Systems 2024-11-08 Julien Ajdenbaum , Emilie Chouzenoux , Claire Lefort , Ségolène Martin , Jean-Christophe Pesquet

While convolutional neural networks (CNNs) and vision transformers (ViTs) have advanced medical image segmentation, they face inherent limitations such as local receptive fields in CNNs and high computational complexity in ViTs. This paper…

Image and Video Processing · Electrical Eng. & Systems 2025-04-02 Pooya Ashtari , Shahryar Noei , Fateme Nateghi Haredasht , Jonathan H. Chen , Giuseppe Jurman , Aleksandra Pizurica , Sabine Van Huffel

Objective: To simultaneously deblur and supersample prostate specific membrane antigen (PSMA) positron emission tomography (PET) images using neural blind deconvolution. Approach: Blind deconvolution is a method of estimating the…

Medical Physics · Physics 2024-04-11 Caleb Sample , Arman Rahmim , Carlos Uribe , François Bénard , Jonn Wu , Roberto Fedrigo , Haley Clark

Images from positron emission tomography (PET) provide metabolic information about the human body. They present, however, a spatial resolution that is limited by physical and instrumental factors often modeled by a blurring function. Since…

Computer Vision and Pattern Recognition · Computer Science 2016-08-08 Stéphanie Guérit , Adriana González , Anne Bol , John A. Lee , Laurent Jacques

A method for spatial deconvolution of spectra is presented. It follows the same fundamental principles as the ``MCS image deconvolution algorithm'' (Magain, Courbin, Sohy, 1998) and uses information contained in the spectrum of a reference…

Astrophysics · Physics 2009-10-31 F. Courbin , P. Magain , M. Kirkove , S. Sohy

Depth completion, which aims to generate high-quality dense depth maps from sparse depth maps, has attracted increasing attention in recent years. Previous work usually employs RGB images as guidance, and introduces iterative spatial…

Computer Vision and Pattern Recognition · Computer Science 2023-08-04 Xinglong Sun , Jean Ponce , Yu-Xiong Wang

In this paper, a novel method to enhance Frequency Modulated Continuous Wave (FMCW) THz imaging resolution beyond its diffraction limit is proposed. Our method comprises two stages. Firstly, we reconstruct the signal in depth-direction…

Image and Video Processing · Electrical Eng. & Systems 2019-07-03 Tak Ming Wong , Matthias Kahl , Peter Haring Bolívar , Andreas Kolb

Photomultiplier tubes (PMTs) are extensively employed as photosensors in neutrino and dark matter detection. The precise charge and timing information extracted from the PMT waveform plays a crucial role in energy and vertex reconstruction.…

Instrumentation and Detectors · Physics 2025-02-14 Jingzhe Tang , Tianying Xiao , Xuan Tang , Yongbo Huang

The purpose of this study is to present a new semi-automated methodology for three-dimensional (3D) reconstruction of coronary arteries and their plaque morphology using Computed Tomography Angiography (CTA) images. The methodology is…

We present a physics-informed deep learning framework to address common limitations in Confocal Laser Scanning Microscopy (CLSM), such as diffraction limited resolution, noise, and undersampling due to low laser power conditions. The…

Materials Science · Physics 2025-01-27 Zaheer Ahmad , Junaid Shabeer , Usman Saleem , Tahir Qadeer , Abdul Sami , Zahira El Khalidi , Saad Mehmood

Calcium imaging data promises to transform the field of neuroscience by making it possible to record from large populations of neurons simultaneously. However, determining the exact moment in time at which a neuron spikes, from a calcium…

Methodology · Statistics 2018-02-22 Sean Jewell , Toby Dylan Hocking , Paul Fearnhead , Daniela Witten

We present a variational Bayesian method of joint image reconstruction and point spread function (PSF) estimation when the PSF of the imaging device is only partially known. To solve this semi-blind deconvolution problem, prior…

Data Analysis, Statistics and Probability · Physics 2013-03-18 Se Un Park , Nicolas Dobigeon , Alfred O. Hero

Perfusion imaging is the current gold standard for acute ischemic stroke analysis. It allows quantification of the salvageable and non-salvageable tissue regions (penumbra and core areas respectively). In clinical settings, the singular…

Image and Video Processing · Electrical Eng. & Systems 2021-04-01 Ezequiel de la Rosa , David Robben , Diana M. Sima , Jan S. Kirschke , Bjoern Menze