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The COVID-19 pandemic has led to significant changes in how people are currently living their lives. To determine how to best reduce the effects of the pandemic and start reopening societies, governments have drawn insights from…

Other Quantitative Biology · Quantitative Biology 2020-09-08 Heather Z. Brooks , Unchitta Kanjanasaratool , Yacoub H. Kureh , Mason A. Porter

Capturing the structured mixing within a population is key to the reliable projection of infectious disease dynamics and hence informed control. Both heterogeneity in the number of contacts and age-structured mixing have been repeatedly…

Social and Information Networks · Computer Science 2026-03-17 Luke Murray Kearney , Emma L Davis , Matt J Keeling

In this work, we integrate the predictive capabilities of compartmental disease dynamics models with machine learning ability to analyze complex, high-dimensional data and uncover patterns that conventional models may overlook.…

Numerical Analysis · Mathematics 2025-05-28 Muhammad Awais , Abu Safyan Ali , Giacomo Dimarco , Federica Ferrarese , Lorenzo Pareschi

Comparing how different populations have suffered under COVID-19 is a core part of ongoing investigations into how public policy and social inequalities influence the number of and severity of COVID-19 cases. But COVID-19 incidence can vary…

Populations and Evolution · Quantitative Biology 2022-11-17 Ryan Wilkinson , Marcus Roper

The COVID-19 pandemic considerably affects public health systems around the world. The lack of knowledge about the virus, the extension of this phenomenon, and the speed of the evolution of the infection are all factors that highlight the…

Computers and Society · Computer Science 2022-10-25 Andrea Loreggia , Anna Passarelli , Maria Silvia Pini

We introduce a new probabilistic model to estimate the real spread of the novel SARS-CoV-2 virus along regions or countries. Our model simulates the behavior of each individual in a population according to a probabilistic model through an…

Populations and Evolution · Quantitative Biology 2020-05-05 Marcos Matabuena , Carlos Meijide-García , Pablo Rodríguez-Mier , Víctor Leborán

The current COVID-19 pandemic has put a huge challenge on the Indian health infrastructure. With more and more people getting affected during the second wave, the hospitals were over-burdened, running out of supplies and oxygen. In this…

Machine Learning · Computer Science 2023-04-27 Debasrita Chakraborty , Debayan Goswami , Susmita Ghosh , Ashish Ghosh , Jonathan H. Chan

We demonstrate an approach to replicate and forecast the spread of the SARS-CoV-2 (COVID-19) pandemic using the toolkit of probabilistic programming languages (PPLs). Our goal is to study the impact of various modeling assumptions and…

Machine Learning · Statistics 2022-03-08 Swapneel Mehta , Noah Kasmanoff

Background: To assist policy makers in taking adequate decisions to stop the spread of COVID-19 pandemic, accurate forecasting of the disease propagation is of paramount importance. Materials and Methods: This paper presents a deep learning…

Social and Information Networks · Computer Science 2020-09-28 Ahmed Ben Said , Abdelkarim Erradi , Hussein Aly , Abdelmonem Mohamed

With COVID-19 affecting every country globally and changing everyday life, the ability to forecast the spread of the disease is more important than any previous epidemic. The conventional methods of disease-spread modeling, compartmental…

Machine Learning · Statistics 2022-08-19 Benjamin Lucas , Behzad Vahedi , Morteza Karimzadeh

In this work, we propose a deep learning approach to forecasting state-level COVID-19 trends of weekly cumulative death in the United States (US) and incident cases in Germany. This approach includes a transformer model, an ensemble method,…

Machine Learning · Computer Science 2023-02-03 Chung Yan Fong , Dit-Yan Yeung

Pandemic control measures like lock-down, restrictions on restaurants and gatherings, social-distancing have shown to be effective in curtailing the spread of COVID-19. However, their sustained enforcement has negative economic effects. To…

Over the past two decades there has been a number of global outbreaks of viral diseases. This has accelerated the efforts to model and forecast the disease spreading, in order to find ways to confine the spreading regionally and between…

Physics and Society · Physics 2020-07-22 Rafael A. Barrio , Kimmo K. Kaski , Gudmundur G. Haraldsson , Thor Aspelund , Tzipe Govezensky

We present results of different approaches to model the evolution of the COVID-19 epidemic in Argentina, with a special focus on the megacity conformed by the city of Buenos Aires and its metropolitan area, including a total of 41 districts…

Physics and Society · Physics 2020-07-15 E. Tagliazucchi , P. Balenzuela , M. Travizano , G. B. Mindlin , P. D. Mininni

Compartmental models are used in epidemiology to capture the evolution of infectious diseases such as COVID-19 in a population by assigning members of it to compartments with labels such as susceptible, infected, and recovered. In a…

Formal Languages and Automata Theory · Computer Science 2024-02-15 Tim Leys , Guillermo A. Perez

Computational models for the simulation of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) epidemic evolution would be extremely useful to support authorities in designing healthcare policies and lockdown measures to…

Populations and Evolution · Quantitative Biology 2020-04-20 Marco Paggi

Because of the rapid spread of COVID-19 to almost every part of the globe, huge volumes of data and case studies have been made available, providing researchers with a unique opportunity to find trends and make discoveries like never…

Machine Learning · Computer Science 2021-10-20 Sarwan Ali , Yijing Zhou , Murray Patterson

The paper presents classification and analysis of the mathematical models of COVID-19 spread in different groups of populations such as the family, school, office (3-100 people), neighborhood (100-5000 people), city, region (0.5-15 million…

Populations and Evolution · Quantitative Biology 2022-02-01 O. I. Krivorotko , S. I. Kabanikhin

Forecasting the evolution of contagion dynamics is still an open problem to which mechanistic models only offer a partial answer. To remain mathematically or computationally tractable, these models must rely on simplifying assumptions,…

Physics and Society · Physics 2021-08-18 Charles Murphy , Edward Laurence , Antoine Allard

Metapopulation models have been a popular tool for the study of epidemic spread over a network of highly populated nodes (cities, provinces, countries) and have been extensively used in the context of the ongoing COVID-19 pandemic. In the…