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Purpose. Brain Magnetic Resonance Images (MRIs) are essential for the diagnosis of neurological diseases. Recently, deep learning methods for unsupervised anomaly detection (UAD) have been proposed for the analysis of brain MRI. These…

Image and Video Processing · Electrical Eng. & Systems 2021-09-15 Marcel Bengs , Finn Behrendt , Julia Krüger , Roland Opfer , Alexander Schlaefer

This paper presents a simple yet effective two-stage framework for semi-supervised medical image segmentation. Unlike prior state-of-the-art semi-supervised segmentation methods that predominantly rely on pseudo supervision directly on…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Huimin Wu , Xiaomeng Li , Kwang-Ting Cheng

Deep learning algorithms have become the golden standard for segmentation of medical imaging data. In most works, the variability and heterogeneity of real clinical data is acknowledged to still be a problem. One way to automatically…

Image and Video Processing · Electrical Eng. & Systems 2022-02-25 Arkadiy Dushatskiy , Gerry Lowe , Peter A. N. Bosman , Tanja Alderliesten

Incorporation of prior knowledge about organ shape and location is key to improve performance of image analysis approaches. In particular, priors can be useful in cases where images are corrupted and contain artefacts due to limitations in…

Automatic segmentation of knee bony anatomy is essential in orthopedics, and it has been around for several years in both pre-operative and post-operative settings. While deep learning algorithms have demonstrated exceptional performance in…

Convolutional networks (ConvNets) have achieved great successes in various challenging vision tasks. However, the performance of ConvNets would degrade when encountering the domain shift. The domain adaptation is more significant while…

Computer Vision and Pattern Recognition · Computer Science 2018-06-20 Qi Dou , Cheng Ouyang , Cheng Chen , Hao Chen , Pheng-Ann Heng

Statistical shape modeling (SSM) is an enabling quantitative tool to study anatomical shapes in various medical applications. However, directly using 3D images in these applications still has a long way to go. Recent deep learning methods…

Computer Vision and Pattern Recognition · Computer Science 2023-10-04 Abu Zahid Bin Aziz , Jadie Adams , Shireen Elhabian

In recent years, deep learning based methods have shown success in essential medical image analysis tasks such as segmentation. Post-processing and refining the results of segmentation is a common practice to decrease the misclassifications…

Image and Video Processing · Electrical Eng. & Systems 2021-08-29 Ufuk Demir , Atahan Ozer , Yusuf H. Sahin , Gozde Unal

Generalization capabilities of learning-based medical image segmentation across domains are currently limited by the performance degradation caused by the domain shift, particularly for ultrasound (US) imaging. The quality of US images…

Image and Video Processing · Electrical Eng. & Systems 2024-02-07 Yuan Bi , Zhongliang Jiang , Ricarda Clarenbach , Reza Ghotbi , Angelos Karlas , Nassir Navab

Barrett's oesophagus (BE) is one of the early indicators of esophageal cancer. Patients with BE are monitored and undergo ablation therapies to minimise the risk, thereby making it eminent to identify the BE area precisely. Automated…

Image and Video Processing · Electrical Eng. & Systems 2020-12-11 Numan Celik , Soumya Gupta , Sharib Ali , Jens Rittscher

We propose a novel unsupervised learning approach to 3D shape correspondence that builds a multiscale matching pipeline into a deep neural network. This approach is based on smooth shells, the current state-of-the-art axiomatic…

Computer Vision and Pattern Recognition · Computer Science 2020-10-30 Marvin Eisenberger , Aysim Toker , Laura Leal-Taixé , Daniel Cremers

Obtaining labelled data in medical image segmentation is challenging due to the need for pixel-level annotations by experts. Recent works have shown that augmenting the object of interest with deformable transformations can help mitigate…

Computer Vision and Pattern Recognition · Computer Science 2023-07-26 Nilesh Kumar , Prashnna K. Gyawali , Sandesh Ghimire , Linwei Wang

This paper addresses the domain shift problem for segmentation. As a solution, we propose OLVA, a novel and lightweight unsupervised domain adaptation method based on a Variational Auto-Encoder (VAE) and Optimal Transport (OT) theory.…

Machine Learning · Computer Science 2021-06-16 Dawood Al Chanti , Diana Mateus

Multi-organ segmentation, which identifies and separates different organs in medical images, is a fundamental task in medical image analysis. Recently, the immense success of deep learning motivated its wide adoption in multi-organ…

Computer Vision and Pattern Recognition · Computer Science 2023-04-17 Jiahua Dong , Guohua Cheng , Yue Zhang , Chengtao Peng , Yu Song , Ruofeng Tong , Lanfen Lin , Yen-Wei Chen

Deep convolutional neural networks have achieved remarkable progress on a variety of medical image computing tasks. A common problem when applying supervised deep learning methods to medical images is the lack of labeled data, which is very…

Computer Vision and Pattern Recognition · Computer Science 2020-05-12 Xiaomeng Li , Lequan Yu , Hao Chen , Chi-Wing Fu , Lei Xing , Pheng-Ann Heng

Although deep neural networks have been a dominant method for many 2D vision tasks, it is still challenging to apply them to 3D tasks, such as medical image segmentation, due to the limited amount of annotated 3D data and limited…

Computer Vision and Pattern Recognition · Computer Science 2020-11-02 Yingwei Li , Zhuotun Zhu , Yuyin Zhou , Yingda Xia , Wei Shen , Elliot K. Fishman , Alan L. Yuille

Due to the poor prognosis of Pancreatic cancer, accurate early detection and segmentation are critical for improving treatment outcomes. However, pancreatic segmentation is challenged by blurred boundaries, high shape variability, and class…

Computer Vision and Pattern Recognition · Computer Science 2023-12-27 Leilei Zeng , Xuechen Li , Xinquan Yang , Linlin Shen , Song Wu

The premorbid geometry of the mandible is of significant relevance in jaw reconstructive surgeries and occasionally unknown to the surgical team. In this paper, an optimization framework is introduced to train deep models for completion…

Machine Learning · Computer Science 2019-10-29 Amir H. Abdi , Mehran Pesteie , Eitan Prisman , Purang Abolmaesumi , Sidney Fels

Unsupervised domain adaptation (UDA) aims to learn a model trained on source domain and performs well on unlabeled target domain. In medical image segmentation field, most existing UDA methods depend on adversarial learning to address the…

Computer Vision and Pattern Recognition · Computer Science 2022-11-29 Shaolei Liu , Siqi Yin , Linhao Qu , Manning Wang

Image segmentation, one of the most critical vision tasks, has been studied for many years. Most of the early algorithms are unsupervised methods, which use hand-crafted features to divide the image into many regions. Recently, owing to the…

Computer Vision and Pattern Recognition · Computer Science 2021-03-11 Qinghong Lin , Weichan Zhong , Jianglin Lu