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It is a fundamental challenge to understand how the function of a network is related to its structural organization. Adaptive dynamical networks represent a broad class of systems that can change their connectivity over time depending on…

Adaptation and Self-Organizing Systems · Physics 2023-04-13 Rico Berner , Thilo Gross , Christian Kuehn , Jürgen Kurths , Serhiy Yanchuk

It is well-known in thermodynamics that the creation of correlations costs work. It seems then a truism that if a thermodynamic transformation A->B is impossible, so will be any transformation that in sending A to B also correlates among…

Quantum Physics · Physics 2015-10-13 Matteo Lostaglio , Markus P. Mueller , Michele Pastena

Understanding the rules underlying organismal development is a major unsolved problem in biology. Each cell in a developing organism responds to signals in its local environment by dividing, excreting, consuming, or reorganizing, yet how…

Cell Behavior · Quantitative Biology 2025-08-20 Ramya Deshpande , Francesco Mottes , Ariana-Dalia Vlad , Michael P. Brenner , Alma dal Co

We interpret the subgraph centrality as the partition function of a network. The entropy, the internal energy and the Helmholtz free energy are defined for networks and molecular graphs on the basis of graph spectral theory. Various…

Physics and Society · Physics 2009-05-27 Ernesto Estrada , Naomichi Hatano

We model the thermodynamics of local structures within the hard sphere liquid at arbitrary volume fractions through the \textit{morphometric} calculation of $n$-body correlations. We calculate absolute free energies of local geometric…

Statistical Mechanics · Physics 2019-02-20 Joshua F. Robinson , Francesco Turci , Roland Roth , C. Patrick Royall

Many multi-agent systems evolve by repeatedly updating each state to a weighted average of its neighbors, a process known as averaging dynamics, whose behavior becomes difficult to analyze when the interaction network varies over time. In…

Optimization and Control · Mathematics 2026-02-24 Bernard Chazelle , Kritkorn Karntikoon

In this paper we study the susceptible-infectious (SI) epidemiological model using dynamical graphs. Dynamical structures have been recently applied in many areas including complex systems. Dynamical structures include the mutual…

Populations and Evolution · Quantitative Biology 2011-10-19 Jose L. Herrera , Gilberto Gonzalez-Parra

Graph processes that unfold in continuous time are of obvious theoretical and practical interest. Particularly useful are those whose long-term behavior converges to a graph distribution of known form. Here, we review some of the conditions…

Methodology · Statistics 2023-02-24 Carter T. Butts

Leveraging hypergraph structures to model advanced processes has gained much attention over the last few years in many areas, ranging from protein-interaction in computational biology to image retrieval using machine learning. Hypergraph…

Human-Computer Interaction · Computer Science 2021-12-07 Maximilian T. Fischer , Alexander Frings , Daniel A. Keim , Daniel Seebacher

In this paper, we consider a contact problem with adhesion between a viscoelastic body and a rigid support, taking thermal effects into account. The PDE system we deal with is derived within the modelling approach proposed by M. Fremond…

Analysis of PDEs · Mathematics 2015-05-14 Elena Bonetti , Giovanna Bonfanti , Riccarda Rossi

Analytical relations for the mechanical response of single polymer chains are valuable for modeling purposes, on both the molecular and the continuum scale. These relations can be obtained using statistical thermodynamics and an idealized…

Statistical Mechanics · Physics 2023-10-02 Michael R. Buche , Meredith N. Silberstein , Scott J. Grutzik

Decomposable dependency models possess a number of interesting and useful properties. This paper presents new characterizations of decomposable models in terms of independence relationships, which are obtained by adding a single axiom to…

Artificial Intelligence · Computer Science 2014-11-17 L. M. deCampos

Starting from a classical Budyko-Sellers-Ghil energy balance model for the average surface temperature of the Earth, a nonautonomous version is designed by allowing the solar irradiance and the cloud cover coefficients to vary with time in…

Atmospheric and Oceanic Physics · Physics 2025-11-25 Iacopo P. Longo , Rafael Obaya , Ana M. Sanz

The long-time dynamics of somatic adaptability in immune system is simulated by a simple physical model. The immune system described by the model exhibits a scale free behavior as is observed in living systems. The balance between the…

Biological Physics · Physics 2009-12-22 Shiro Saito , Osamu Narikiyo

Obesity does not emerge abruptly; rather, it develops gradually over extended periods. The gradual progression often prevents early recognition of physiological changes until excess adiposity is established. A common belief is that weight…

Quantitative Methods · Quantitative Biology 2026-03-18 Soheil Saghafi , Gari D. Clifford

Being cognizant of the abundance of multi-body interactions in various complex systems, here we investigate a possible way to incorporate multi-body interactions in dynamical networks. Adopting hypergraph as the underlying architecture aids…

Dynamical Systems · Mathematics 2023-03-24 Anirban Banerjee , Samiron Parui

Correlation coefficients play a pivotal role in quantifying linear relationships between random variables. Yet, their application to time series data is very challenging due to temporal dependencies. This paper introduces a novel approach…

Methodology · Statistics 2024-01-09 Johan Medrano , Abderrahmane Kheddar , Sofiane Ramdani

The topology and form finding of tensegrity structures have been studied extensively since the introduction of the tensegrity concept. However, most of these studies address topology and form separately, where the former represented a…

Computational Geometry · Computer Science 2019-02-27 Omar Aloui , Jessica Flores , David Orden , Landolf Rhode-Barbarigos

We proposed social synergetics and the four basic theorems, in which theorem of perfect correlation on humanity is researched mathematically. Generally, we discuss the four variables and the eight aspects in social physics. We search social…

General Physics · Physics 2009-11-10 Yi-Fang Chang

The Free-Energy Principle (FEP) [1-3] has been adopted in a variety of ambitious proposals that aim to characterize all adaptive, sentient, and cognitive systems within a unifying framework. Judging by the amount of attention it has…

Neurons and Cognition · Quantitative Biology 2024-01-18 Zahra Sheikhbahaee , Adam Safron , Casper Hesp , Guillaume Dumas