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Using molecular dynamics computer simulations we investigate the out-of-equilibrium dynamics of a Lennard-Jones system after a quench from a high temperature to one below the glass transition temperature. By studying the radial distribution…

Statistical Mechanics · Physics 2009-10-31 Walter Kob , Jean-Louis Barrat , Francesco Sciortino , Piero Tartaglia

We introduce a model of biological evolution where species evolve in response to biotic interactions and a fluctuating environmental stress. The species may either become extinct or mutate to acquire a new fitness value when the effective…

Statistical Mechanics · Physics 2012-12-19 Debarshee Bagchi , P. K. Mohanty

Complex systems having metastable elements often demonstrate nearly log-time relaxations and a kind of aging: repeated stimuli weaken the system's relaxational response. Granular matter is known to exhibit a wealth of such behaviors, for…

Soft Condensed Matter · Physics 2014-06-16 V. Y. Zaitsev , V. E. Gusev , V. Tournat , P. Richard

The far-from-equilibrium dynamics of glassy systems share important phenomenological traits. A transition is generally observed from a time-homogeneous dynamical regime to an aging regime where physical changes occur intermittently and, on…

Soft Condensed Matter · Physics 2015-03-13 S. Boettcher , P. Sibani

Population dynamics on a rugged landscape is studied analytically and numerically within a simple discrete model for evolution of N individuals in one-dimensional fitness space. We reduce the set of master equations to a single Fokker-Plank…

adap-org · Physics 2015-06-30 Igor Aranson , Lev Tsimring , Valerii Vinokur

We perform extensive simulations of a binary mixture Lennard-Jones system subjected to a temperature jump in order to study the time evolution of fluctuations during aging. Analyzing data from 1500 different aging realizations, we calculate…

Disordered Systems and Neural Networks · Physics 2009-11-10 I. Saika-Voivod , F. Sciortino

We study out of equilibrium dynamics and aging for a particle diffusing in one dimensional environments, such as the random force Sinai model, as a toy model for low dimensional systems. We study fluctuations of two times $(t_w, t)$…

Statistical Mechanics · Physics 2009-10-30 Laurent Laloux , Pierre Le Doussal

We study the intermittent behavior of the energy decay and linear magnetic response of a glassy system during isothermal aging after a deep thermal quench using the Edward-Anderson spin glass model as a paradigmatic example. The large…

Statistical Mechanics · Physics 2008-01-02 Paolo Sibani

The Lotka-Volterra (LV) model is a simple, robust, and versatile model used to describe large interacting systems such as food webs or microbiomes. The model consists of $n$ coupled differential equations linking the abundances of $n$…

Populations and Evolution · Quantitative Biology 2024-08-28 Maxime Clenet , François Massol , Jamal Najim

Ignoring the differences between countries, human reproductive and dispersal behaviors can be described by some standardized models, so whether there is a universal law of population growth hidden in the abundant and unstructured data from…

Physics and Society · Physics 2024-02-08 Jiajun Ma , Qinghua Chen , Xiaosong Chen , Jingfang Fan , Xiaomeng Li , Yi Shi

We consider a system of nonlinear partial differential equations that describes an age-structured population living in changing environment on $N$ patches. We prove existence and uniqueness of solution and analyze large time behavior of the…

Dynamical Systems · Mathematics 2016-08-17 Vladimir Kozlov , Sonja Radosavljevic , Vladimir G. Tkachev , Uno Wennergren

A probability model is presented for the dynamics of mutation-selection balance in a haploid infinite-population infinite-sites setting sufficiently general to cover mutation-driven changes in full age-specific demographic schedules. The…

Populations and Evolution · Quantitative Biology 2007-05-23 David Steinsaltz , Steven N. Evans , Kenneth W. Wachter

We study the Metropolis dynamics of the simplest mean-field spin glass model, the Random Energy Model. We show that this dynamics exhibits aging by showing that the properly rescaled time change process between the Metropolis dynamics and a…

Probability · Mathematics 2015-02-17 Jiří Černý , Tobias Wassmer

We study the evolution in discrete time of certain age-structured populations, such as adults and juveniles, with a Ricker fitness function. We determine conditions for the convergence of orbits to the origin (extinction) in the presence of…

Dynamical Systems · Mathematics 2017-02-10 N. Lazaryan , H. Sedaghat

A simple, non-disordered spin model has been studied in an effort to understand the origin of the precipitous slowing down of dynamics observed in supercooled liquids approaching the glass transition. A combination of Monte Carlo…

Statistical Mechanics · Physics 2009-11-07 Hui Yin , Bulbul Chakraborty

We analyze the nonlinear relaxation of a complex ecosystem composed of many interacting species. The ecological system is described by generalized Lotka-Volterra equations with a multiplicative noise. The transient dynamics is studied in…

Statistical Mechanics · Physics 2016-11-23 M. A. Cirone , F. de Pasquale , B. Spagnolo

We consider a cyclically competing species model on a ring with global mixing at finite rate, which corresponds to the well-known Lotka-Volterra equation in the limit of infinite mixing rate. Within a perturbation analysis of the model from…

Populations and Evolution · Quantitative Biology 2017-03-28 Cilie W. Feldager , Namiko Mitarai , Hiroki Ohta

The paper deals with a multiple species Lotka-Volterra model with infinite distributed delays and feedback controls, for which we assume a weak form of diagonal dominance of the instantaneous negative intra-specific terms over the infinite…

Classical Analysis and ODEs · Mathematics 2013-07-29 Teresa Faria , Yoshiaki Muroya

Frequency dependent selection and demographic fluctuations play important roles in evolutionary and ecological processes. Under frequency dependent selection, the average fitness of the population may increase or decrease based on…

Populations and Evolution · Quantitative Biology 2015-06-23 Weini Huang , Christoph Hauert , Arne Traulsen

Mass extinction is a phenomenon in the history of life on Earth when a considerable number of species go extinct over a relatively short period of time. The magnitude of extinction varies between the events, the most well known are the…

Adaptation and Self-Organizing Systems · Physics 2022-08-29 Amer Alsulami , Sergei Petrovskii
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