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We develop a learning framework for building deformable templates, which play a fundamental role in many image analysis and computational anatomy tasks. Conventional methods for template creation and image alignment to the template have…

Computer Vision and Pattern Recognition · Computer Science 2019-10-14 Adrian V. Dalca , Marianne Rakic , John Guttag , Mert R. Sabuncu

Multi-modality is widely used in medical imaging, because it can provide multiinformation about a target (tumor, organ or tissue). Segmentation using multimodality consists of fusing multi-information to improve the segmentation. Recently,…

Image and Video Processing · Electrical Eng. & Systems 2020-07-17 Tongxue Zhou , Su Ruan , Stéphane Canu

Deep convolutional neural networks have significantly boosted the performance of fundus image segmentation when test datasets have the same distribution as the training datasets. However, in clinical practice, medical images often exhibit…

Computer Vision and Pattern Recognition · Computer Science 2020-10-14 Shujun Wang , Lequan Yu , Kang Li , Xin Yang , Chi-Wing Fu , Pheng-Ann Heng

Despite deep convolutional neural networks achieved impressive progress in medical image computing and analysis, its paradigm of supervised learning demands a large number of annotations for training to avoid overfitting and achieving…

Computer Vision and Pattern Recognition · Computer Science 2020-12-11 Liyan Sun , Chenxin Li , Xinghao Ding , Yue Huang , Guisheng Wang , Yizhou Yu

Deep learning has achieved remarkable success in medical image analysis, however its adoption in clinical practice is limited by a lack of interpretability. These models often make correct predictions without explaining their reasoning.…

Image and Video Processing · Electrical Eng. & Systems 2025-10-03 Jhonatan Contreras , Thomas Bocklitz

We propose a novel transformer-style architecture called Global-Local Filter Network (GLFNet) for medical image segmentation and demonstrate its state-of-the-art performance. We replace the self-attention mechanism with a combination of…

Computer Vision and Pattern Recognition · Computer Science 2024-09-02 Athanasios Tragakis , Qianying Liu , Chaitanya Kaul , Swalpa Kumar Roy , Hang Dai , Fani Deligianni , Roderick Murray-Smith , Daniele Faccio

We present a new instance segmentation approach tailored to biological images, where instances may correspond to individual cells, organisms or plant parts. Unlike instance segmentation for user photographs or road scenes, in biological…

Computer Vision and Pattern Recognition · Computer Science 2020-04-24 Victor Kulikov , Victor Lempitsky

Convolutional Neural Networks (CNNs) have been recently employed to solve problems from both the computer vision and medical image analysis fields. Despite their popularity, most approaches are only able to process 2D images while most…

Computer Vision and Pattern Recognition · Computer Science 2016-06-16 Fausto Milletari , Nassir Navab , Seyed-Ahmad Ahmadi

Deep learning has shown great potential for automated medical image segmentation to improve the precision and speed of disease diagnostics. However, the task presents significant difficulties due to variations in the scale, shape, texture,…

Image and Video Processing · Electrical Eng. & Systems 2024-09-06 Shahzaib Iqbal , Tariq M. Khan , Syed S. Naqvi , Asim Naveed , Erik Meijering

Magnetic resonance imaging (MRI) is the non-invasive modality of choice for body tissue composition analysis due to its excellent soft tissue contrast and lack of ionizing radiation. However, quantification of body composition requires an…

Computer Vision and Pattern Recognition · Computer Science 2018-10-16 Ismail Irmakci , Sarfaraz Hussein , Aydogan Savran , Rita R. Kalyani , David Reiter , Chee W. Chia , Kenneth W. Fishbein , Richard G. Spencer , Luigi Ferrucci , Ulas Bagci

Anatomical segmentation is a fundamental task in medical image computing, generally tackled with fully convolutional neural networks which produce dense segmentation masks. These models are often trained with loss functions such as…

Image and Video Processing · Electrical Eng. & Systems 2022-11-28 Nicolás Gaggion , Lucas Mansilla , Candelaria Mosquera , Diego H. Milone , Enzo Ferrante

Image compositing is a method used to generate realistic yet fake imagery by inserting contents from one image to another. Previous work in compositing has focused on improving appearance compatibility of a user selected foreground segment…

Graphics · Computer Science 2017-12-05 Fuwen Tan , Crispin Bernier , Benjamin Cohen , Vicente Ordonez , Connelly Barnes

Color images are easy to understand visually and can acquire a great deal of information, such as color and texture. They are highly and widely used in tasks such as segmentation. On the other hand, in indoor person segmentation, it is…

Computer Vision and Pattern Recognition · Computer Science 2022-05-12 Risako Tanigawa , Yasunori Ishii , Kazuki Kozuka , Takayoshi Yamashita

Existing deep learning methods in multimode fiber (MMF) imaging often focus on simpler datasets, limiting their applicability to complex, real-world imaging tasks. These models are typically data-intensive, a challenge that becomes more…

Computer Vision and Pattern Recognition · Computer Science 2025-11-26 Jawaria Maqbool , M. Imran Cheema

Due to the cross-domain distribution shift aroused from diverse medical imaging systems, many deep learning segmentation methods fail to perform well on unseen data, which limits their real-world applicability. Recent works have shown the…

Computer Vision and Pattern Recognition · Computer Science 2023-03-06 Shangqi Gao , Hangqi Zhou , Yibo Gao , Xiahai Zhuang

One of the most common tasks in medical imaging is semantic segmentation. Achieving this segmentation automatically has been an active area of research, but the task has been proven very challenging due to the large variation of anatomy…

Computer Vision and Pattern Recognition · Computer Science 2018-04-10 Holger R. Roth , Chen Shen , Hirohisa Oda , Masahiro Oda , Yuichiro Hayashi , Kazunari Misawa , Kensaku Mori

Purpose: To allow fast and high-quality reconstruction of clinical accelerated multi-coil MR data by learning a variational network that combines the mathematical structure of variational models with deep learning. Theory and Methods:…

Computer Vision and Pattern Recognition · Computer Science 2017-04-04 Kerstin Hammernik , Teresa Klatzer , Erich Kobler , Michael P Recht , Daniel K Sodickson , Thomas Pock , Florian Knoll

Humans tend to decompose a sentence into different parts like \textsc{sth do sth at someplace} and then fill each part with certain content. Inspired by this, we follow the \textit{principle of modular design} to propose a novel image…

Computer Vision and Pattern Recognition · Computer Science 2023-04-25 Xu Yang , Hanwang Zhang , Chongyang Gao , Jianfei Cai

Medical image segmentation plays a vital role in various clinical applications, enabling accurate delineation and analysis of anatomical structures or pathological regions. Traditional CNNs have achieved remarkable success in this field.…

Image and Video Processing · Electrical Eng. & Systems 2024-04-18 Seyed M. R. Modaresi , Aomar Osmani , Mohammadreza Razzazi , Abdelghani Chibani

Deep learning models have become the dominant method for medical image segmentation. However, they often struggle to be generalisable to unknown tasks involving new anatomical structures, labels, or shapes. In these cases, the model needs…

Image and Video Processing · Electrical Eng. & Systems 2024-09-17 Jing Xu