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The field of digital pathology has seen a proliferation of deep learning models in recent years. Despite substantial progress, it remains rare for other researchers and pathologists to be able to access models published in the literature…

Tissues and Organs · Quantitative Biology 2024-01-15 Jakub R. Kaczmarzyk , Alan O'Callaghan , Fiona Inglis , Tahsin Kurc , Rajarsi Gupta , Erich Bremer , Peter Bankhead , Joel H. Saltz

A new library VecAmpFit for multidimensional amplitude analyses in high-energy physics has been developed for an ongoing amplitude analysis at Belle II experiment. It includes a fitter performing likelihood calculation and…

Data Analysis, Statistics and Probability · Physics 2026-03-23 K. Chilikin

SAXSFit is a computer analysis program that has been developed to assist in the fitting of small-angle x-ray and neutron scattering spectra primarily from nanoparticles (nanopores). The fitting procedure yields the pore or particle size…

Data Analysis, Statistics and Probability · Physics 2009-02-02 Bridget Ingham , Haiyong Li , Emily L. Allen , Michael F. Toney

We present new sets of nuclear parton distribution functions (nPDFs) at next-to-leading order (NLO) and next-to-next-to-leading order (NNLO). Our analyses are based on deeply inelastic scattering data with charged-lepton and neutrino beams…

High Energy Physics - Phenomenology · Physics 2019-12-17 Marina Walt , Ilkka Helenius , Werner Vogelsang

We present allesfitter, a public and open-source python software for flexible and robust inference of stars and exoplanets given photometric and radial velocity data. Allesfitter offers a rich selection of orbital and transit/eclipse…

Earth and Planetary Astrophysics · Physics 2021-05-05 Maximilian N. Günther , Tansu Daylan

This paper describes a modular framework for the description of electroweak scattering and decay processes, including but not limited to Z-resonance physics. The framework consistently combines a complex-pole expansion near a s-channel…

High Energy Physics - Phenomenology · Physics 2023-10-12 Lisong Chen , Ayres Freitas

Much of the progress made in time-domain astronomy is accomplished by relating observational multi-wavelength time series data to models derived from our understanding of physical laws. This goal is typically accomplished by dividing the…

Instrumentation and Methods for Astrophysics · Physics 2018-05-23 James Guillochon , Matt Nicholl , V. Ashley Villar , Brenna Mockler , Gautham Narayan , Kaisey S. Mandel , Edo Berger , Peter K. G. Williams

Statistical modeling is a key element in many scientific fields and especially in High-Energy Physics (HEP) analysis. The standard framework to perform this task in HEP is the C++ ROOT/RooFit toolkit; with Python bindings that are only…

Data Analysis, Statistics and Probability · Physics 2020-05-21 Jonas Eschle , Albert Puig Navarro , Rafael Silva Coutinho , Nicola Serra

We introduce SciWING, an open-source software toolkit which provides access to pre-trained models for scientific document processing tasks, inclusive of citation string parsing and logical structure recovery. SciWING enables researchers to…

Digital Libraries · Computer Science 2020-10-26 Abhinav Ramesh Kashyap , Min-Yen Kan

Feature extraction is a critical component of many applied data science workflows. In recent years, rapid advances in artificial intelligence and machine learning have led to an explosion of feature extraction tools and services that allow…

Computer Vision and Pattern Recognition · Computer Science 2017-02-22 Quinten McNamara , Alejandro de la Vega , Tal Yarkoni

A free data-analysis framework for muSR has been developed. musrfit is fully written in C++, is running under GNU/Linux, Mac OS X, as well as Microsoft Windows, and is distributed under the terms of the GNU GPL. It is based on the CERN ROOT…

Data Analysis, Statistics and Probability · Physics 2012-12-21 A. Suter , B. M. Wojek

The library scikit-fda is a Python package for Functional Data Analysis (FDA). It provides a comprehensive set of tools for representation, preprocessing, and exploratory analysis of functional data. The library is built upon and integrated…

This posting announces public availability of version 1.2 of the DiskFit software package developed by the authors, which may be used to fit simple non-axisymmetric models either to images or to velocity fields of disk galaxies. Here we…

Astrophysics of Galaxies · Physics 2015-09-25 J. A. Sellwood , Kristine Spekkens

Recently vision transformer models have become prominent models for a range of tasks. These models, however, usually suffer from intensive computational costs and heavy memory requirements, making them impractical for deployment on edge…

Computer Vision and Pattern Recognition · Computer Science 2023-06-06 Lu Yu , Wei Xiang

As part of the Snowmass process, the Cosmic Frontier WIMP Direct Detection subgroup (CF1) has drawn on input from the Cosmic Frontier and the broader Particle Physics community to produce this document. The charge to CF1 was (a) to…

Snowmass is a US long-term planning study for the high-energy community by the American Physical Society's Division of Particles and Fields. For its simulation studies, opportunistic resources are harnessed using the Open Science Grid…

High Energy Physics - Experiment · Physics 2013-10-03 A. Avetisyan , S. Bhattacharya , M. Narain , S. Padhi , J. Hirschauer , T. Levshina , P. McBride , C. Sehgal , M. Slyz , M. Rynge , S. Malik , J. Stupak

We present a new software package designed to reduce the computational burden of hadron collider measurements in Parton Distribution Function (PDF) fits. The APFELgrid package converts interpolated weight tables provided by APPLgrid files…

High Energy Physics - Phenomenology · Physics 2017-01-04 Valerio Bertone , Stefano Carrazza , Nathan P. Hartland

As the complexity of state-of-the-art deep learning models increases by the month, implementation, interpretation, and traceability become ever-more-burdensome challenges for AI practitioners around the world. Several AI frameworks have…

The Advanced Research WRF (Weather Research and Forecasting) model is a popular atmospheric model used for research and Numerical Weather Prediction (NWP). However, despite its popularity, its set-up and configuration often demand several…

Atmospheric and Oceanic Physics · Physics 2019-12-06 D. Meyer , M. Riechert

Fitting complicated models to large datasets is a bottleneck of many analyses. We present GooFit, a library and tool for constructing arbitrarily-complex probability density functions (PDFs) to be evaluated on nVidia GPUs or on multicore…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-06-17 R. Andreassen , B. T. Meadows , M. de Silva , M. D. Sokoloff , K. Tomko