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Universal models for medical image segmentation, such as interactive and in-context learning (ICL) models, offer strong generalization but require extensive annotations. Interactive models need repeated user prompts for each image, while…

Computer Vision and Pattern Recognition · Computer Science 2025-10-09 Jiesi Hu , Yanwu Yang , Zhiyu Ye , Jinyan Zhou , Jianfeng Cao , Hanyang Peng , Ting Ma

Many ways of annotating a dataset for machine learning classification tasks that go beyond the usual class labels exist in practice. These are of interest as they can simplify or facilitate the collection of annotations, while not greatly…

Method: We develop CNN-based methods for automatic ICD coding based on clinical text from intensive care unit (ICU) stays. We come up with the Shallow and Wide Attention convolutional Mechanism (SWAM), which allows our model to learn local…

Computation and Language · Computer Science 2021-01-28 Shu Yuan Hu , Fei Teng

Learning to represent free text is a core task in many clinical machine learning (ML) applications, as clinical text contains observations and plans not otherwise available for inference. State-of-the-art methods use large language models…

Computation and Language · Computer Science 2023-01-30 Lecheng Kong , Christopher King , Bradley Fritz , Yixin Chen

Weakly-supervised text classification aims to train a classifier using only class descriptions and unlabeled data. Recent research shows that keyword-driven methods can achieve state-of-the-art performance on various tasks. However, these…

Computation and Language · Computer Science 2022-12-16 Tingyu Xia , Yue Wang , Yuan Tian , Yi Chang

Real-world text classification tasks often require many labeled training examples that are expensive to obtain. Recent advancements in machine teaching, specifically the data programming paradigm, facilitate the creation of training data…

Machine Learning · Computer Science 2020-02-05 Neil Mallinar , Abhishek Shah , Tin Kam Ho , Rajendra Ugrani , Ayush Gupta

Medical coding translates free-text clinical documentation into standardized codes drawn from classification systems that contain tens of thousands of entries and are updated annually. It is central to billing, clinical research, and…

Artificial Intelligence · Computer Science 2026-04-01 Joakim Edin , Andreas Motzfeldt , Simon Flachs , Lars Maaløe

A significant proportion of clinical physiologic monitoring alarms are false. This often leads to alarm fatigue in clinical personnel, inevitably compromising patient safety. To combat this issue, researchers have attempted to build Machine…

Machine Learning · Computer Science 2022-06-22 Arnab Dey , Mononito Goswami , Joo Heung Yoon , Gilles Clermont , Michael Pinsky , Marilyn Hravnak , Artur Dubrawski

Linking clinical narratives to standardized vocabularies and coding systems is a key component of unlocking the information in medical text for analysis. However, many domains of medical concepts lack well-developed terminologies that can…

Computation and Language · Computer Science 2021-03-11 Denis Newman-Griffis , Eric Fosler-Lussier

This study aims to explore the implementation of Natural Language Processing (NLP) and machine learning (ML) techniques to automate the coding of medical letters with visualised explainability and light-weighted local computer settings.…

Computation and Language · Computer Science 2024-07-19 Jamie Glen , Lifeng Han , Paul Rayson , Goran Nenadic

Objective: To detect and classify features of stigmatizing and biased language in intensive care electronic health records (EHRs) using natural language processing techniques. Materials and Methods: We first created a lexicon and regular…

Computation and Language · Computer Science 2025-07-15 Drew Walker , Annie Thorne , Sudeshna Das , Jennifer Love , Hannah LF Cooper , Melvin Livingston , Abeed Sarker

Due to the lack of expertise for medical image annotation, the investigation of label-efficient methodology for medical image segmentation becomes a heated topic. Recent progresses focus on the efficient utilization of weak annotations…

Image and Video Processing · Electrical Eng. & Systems 2022-03-14 Junwen Pan , Qi Bi , Yanzhan Yang , Pengfei Zhu , Cheng Bian

With large volumes of health care data comes the research area of computational phenotyping, making use of techniques such as machine learning to describe illnesses and other clinical concepts from the data itself. The "traditional"…

Machine Learning · Statistics 2016-12-30 Chris Hodapp

Clinical notes, which can be embedded into electronic medical records, document patient care delivery and summarize interactions between healthcare providers and patients. These clinical notes directly inform patient care and can also…

Computation and Language · Computer Science 2022-03-25 Suzanna Schmeelk , Martins Samuel Dogo , Yifan Peng , Braja Gopal Patra

Clinical interactions are initially recorded and documented in free text medical notes. ICD coding is the task of classifying and coding all diagnoses, symptoms and procedures associated with a patient's visit. The process is often manual…

Information Retrieval · Computer Science 2020-06-09 Zachariah Zhang , Jingshu Liu , Narges Razavian

Prediction of medical codes from clinical notes is both a practical and essential need for every healthcare delivery organization within current medical systems. Automating annotation will save significant time and excessive effort spent by…

Computation and Language · Computer Science 2021-07-23 Byung-Hak Kim , Varun Ganapathi

Clinicians spend a significant amount of time inputting free-form textual notes into Electronic Health Records (EHR) systems. Much of this documentation work is seen as a burden, reducing time spent with patients and contributing to…

Computation and Language · Computer Science 2018-08-09 Peter J. Liu

Multi-label text classification (MLTC) is the task of assigning multiple labels to a given text, and has a wide range of application domains. Most existing approaches require an enormous amount of annotated data to learn a classifier and/or…

Computation and Language · Computer Science 2023-09-26 Muberra Ozmen , Joseph Cotnareanu , Mark Coates

Categorizing documents into a given label hierarchy is intuitively appealing due to the ubiquity of hierarchical topic structures in massive text corpora. Although related studies have achieved satisfying performance in fully supervised…

Computation and Language · Computer Science 2023-10-24 Yu Zhang , Xiusi Chen , Yu Meng , Jiawei Han

Current text classification methods typically require a good number of human-labeled documents as training data, which can be costly and difficult to obtain in real applications. Humans can perform classification without seeing any labeled…

Computation and Language · Computer Science 2020-10-15 Yu Meng , Yunyi Zhang , Jiaxin Huang , Chenyan Xiong , Heng Ji , Chao Zhang , Jiawei Han
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