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We introduce TeraHAC, a $(1+\epsilon)$-approximate hierarchical agglomerative clustering (HAC) algorithm which scales to trillion-edge graphs. Our algorithm is based on a new approach to computing $(1+\epsilon)$-approximate HAC, which is a…

Data Structures and Algorithms · Computer Science 2024-06-12 Laxman Dhulipala , Jason Lee , Jakub Łącki , Vahab Mirrokni

Average linkage Hierarchical Agglomerative Clustering (HAC) is an extensively studied and applied method for hierarchical clustering. Recent applications to massive datasets have driven significant interest in near-linear-time and efficient…

Data Structures and Algorithms · Computer Science 2025-02-06 MohammadHossein Bateni , Laxman Dhulipala , Kishen N Gowda , D Ellis Hershkowitz , Rajesh Jayaram , Jakub Łącki

We study the widely used hierarchical agglomerative clustering (HAC) algorithm on edge-weighted graphs. We define an algorithmic framework for hierarchical agglomerative graph clustering that provides the first efficient $\tilde{O}(m)$ time…

Data Structures and Algorithms · Computer Science 2021-06-11 Laxman Dhulipala , David Eisenstat , Jakub Łącki , Vahab Mirrokni , Jessica Shi

This paper studies the hierarchical clustering problem, where the goal is to produce a dendrogram that represents clusters at varying scales of a data set. We propose the ParChain framework for designing parallel hierarchical agglomerative…

Data Structures and Algorithms · Computer Science 2022-02-15 Shangdi Yu , Yiqiu Wang , Yan Gu , Laxman Dhulipala , Julian Shun

Hierarchical Agglomerative Clustering (HAC) is one of the oldest but still most widely used clustering methods. However, HAC is notoriously hard to scale to large data sets as the underlying complexity is at least quadratic in the number of…

Hierarchical Agglomerative Clustering (HAC) is an extensively studied and widely used method for hierarchical clustering in $\mathbb{R}^k$ based on repeatedly merging the closest pair of clusters according to an input linkage function $d$.…

Data Structures and Algorithms · Computer Science 2025-07-29 MohammadHossein Bateni , Laxman Dhulipala , Willem Fletcher , Kishen N Gowda , D Ellis Hershkowitz , Rajesh Jayaram , Jakub Łącki

We consider the problem of maintaining a hierarchical agglomerative clustering (HAC) in the dynamic setting, when the input is subject to point insertions and deletions. We introduce DynHAC - the first dynamic HAC algorithm for the popular…

Data Structures and Algorithms · Computer Science 2025-01-15 Shangdi Yu , Laxman Dhulipala , Jakub Łącki , Nikos Parotsidis

Hierarchical agglomerative clustering (HAC) is a popular algorithm for clustering data, but despite its importance, no dynamic algorithms for HAC with good theoretical guarantees exist. In this paper, we study dynamic HAC on edge-weighted…

Data Structures and Algorithms · Computer Science 2022-07-13 Tom Tseng , Laxman Dhulipala , Julian Shun

We give an efficient algorithm for Centroid-Linkage Hierarchical Agglomerative Clustering (HAC), which computes a $c$-approximate clustering in roughly $n^{1+O(1/c^2)}$ time. We obtain our result by combining a new Centroid-Linkage HAC…

Data Structures and Algorithms · Computer Science 2024-06-10 MohammadHossein Bateni , Laxman Dhulipala , Willem Fletcher , Kishen N Gowda , D Ellis Hershkowitz , Rajesh Jayaram , Jakub Łącki

Exact hierarchical agglomerative clustering (HAC) of large spatial datasets is limited in practice by the $\mathcal{O}(n^2)$ time and memory required for the full pairwise distance matrix. We present GSHAC (Geographically Sparse…

Data Structures and Algorithms · Computer Science 2026-04-14 Victor Maus , Vinicius Pozzobon Borin

Hierarchical Agglomerative Clustering (HAC) is a widely-used clustering method based on repeatedly merging the closest pair of clusters, where inter-cluster distances are determined by a linkage function. Unlike many clustering methods, HAC…

Graph clustering has many important applications in computing, but due to growing sizes of graphs, even traditionally fast clustering methods such as spectral partitioning can be computationally expensive for real-world graphs of interest.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-11 Julian Shun , Farbod Roosta-Khorasani , Kimon Fountoulakis , Michael W. Mahoney

Hierarchical Agglomerative Clustering (HAC) is likely the earliest and most flexible clustering method, because it can be used with many distances, similarities, and various linkage strategies. It is often used when the number of clusters…

Machine Learning · Statistics 2023-09-07 Erich Schubert , Andreas Lang

We develop an algorithm that finds the consensus of many different clustering solutions of a graph. We formulate the problem as a median set partitioning problem and propose a greedy optimization technique. Unlike other approaches that find…

Information Retrieval · Computer Science 2024-08-22 Md Taufique Hussain , Mahantesh Halappanavar , Samrat Chatterjee , Filippo Radicchi , Santo Fortunato , Ariful Azad

An agglomerative hierarchical clustering (AHC) framework and algorithm named HOSil based on a new linkage metric optimized by the average silhouette width (ASW) index is proposed. A conscientious investigation of various clustering methods…

Methodology · Statistics 2019-09-30 Fatima Batool

Spectral clustering methodologies, when extended to accommodate signed graphs, have encountered notable limitations in effectively encapsulating inherent grouping relationships. Recent findings underscore a substantial deterioration in the…

Social and Information Networks · Computer Science 2025-01-15 Muhieddine Shebaro , Lucas Rusnak , Martin Burtscher , Jelena Tešić

Hierarchical clustering over graphs is a fundamental task in data mining and machine learning with applications in domains such as phylogenetics, social network analysis, and information retrieval. Specifically, we consider the recently…

Data Structures and Algorithms · Computer Science 2022-06-16 Arpit Agarwal , Sanjeev Khanna , Huan Li , Prathamesh Patil

Hierarchical Agglomerative Clustering (HAC) algorithms are extensively utilized in modern data science, and seek to partition the dataset into clusters while generating a hierarchical relationship between the data samples. HAC algorithms…

Machine Learning · Computer Science 2023-08-01 Anshuman Chhabra , Prasant Mohapatra

Processing large complex networks like social networks or web graphs has recently attracted considerable interest. In order to do this in parallel, we need to partition them into pieces of about equal size. Unfortunately, previous parallel…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-01-27 Henning Meyerhenke , Peter Sanders , Christian Schulz

Hierarchical Clustering (HC) is a widely studied problem in exploratory data analysis, usually tackled by simple agglomerative procedures like average-linkage, single-linkage or complete-linkage. In this paper we focus on two objectives,…

Data Structures and Algorithms · Computer Science 2018-08-08 Moses Charikar , Vaggos Chatziafratis , Rad Niazadeh
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