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Feature extraction and dimension reduction for networks is critical in a wide variety of domains. Efficiently and accurately learning features for multiple graphs has important applications in statistical inference on graphs. We propose a…

Applications · Statistics 2021-06-23 Shangsi Wang , Jesús Arroyo , Joshua T. Vogelstein , Carey E. Priebe

Clustering and community detection with multiple graphs have typically focused on aligned graphs, where there is a mapping between nodes across the graphs (e.g., multi-view, multi-layer, temporal graphs). However, there are numerous…

Social and Information Networks · Computer Science 2019-04-11 Guilherme Gomes , Vinayak Rao , Jennifer Neville

Community detection is a central problem in graph analysis, with applications ranging from network science to graph signal processing. In recent years, Graph Neural Networks (GNNs) have emerged as effective tools for learning…

Numerical Analysis · Mathematics 2026-05-20 Roberto Cavoretto , Alessandra De Rossi , Enrico Montini

As networks continue to increase in size, current methods must be capable of handling large numbers of nodes and edges in order to be practically relevant. Instead of working directly with the entire (large) network, analyzing sub-networks…

Social and Information Networks · Computer Science 2025-04-03 Eric Yanchenko

This paper focuses on two fundamental tasks of graph analysis: community detection and node representation learning, which capture the global and local structures of graphs, respectively. In the current literature, these two tasks are…

Social and Information Networks · Computer Science 2019-09-18 Fan-Yun Sun , Meng Qu , Jordan Hoffmann , Chin-Wei Huang , Jian Tang

Small subgraphs (graphlets) are important features to describe fundamental units of a large network. The calculation of the subgraph frequency distributions has a wide application in multiple domains including biology and engineering.…

Machine Learning · Computer Science 2022-07-15 Zhongren Chen , Xinyue Xu , Shengyi Jiang , Hao Wang , Lu Mi

We focus on graph classification using a graph neural network (GNN) model that precomputes the node features using a bank of neighborhood aggregation graph operators arranged in parallel. These GNN models have a natural advantage of reduced…

Machine Learning · Computer Science 2022-11-23 Siddhant Doshi , Sundeep Prabhakar Chepuri

Mapper, a topological algorithm, is frequently used as an exploratory tool to build a graphical representation of data. This representation can help to gain a better understanding of the intrinsic shape of high-dimensional genomic data and…

Genomics · Quantitative Biology 2023-07-19 Erik J. Amézquita , Farzana Nasrin , Kathleen M. Storey , Masato Yoshizawa

Learning community structures in graphs has broad applications across scientific domains. While graph neural networks (GNNs) have been successful in encoding graph structures, existing GNN-based methods for community detection are limited…

Machine Learning · Statistics 2024-08-05 Yueqi Wang , Yoonho Lee , Pallab Basu , Juho Lee , Yee Whye Teh , Liam Paninski , Ari Pakman

Different network models have been suggested for the topology underlying complex interactions in natural systems. These models are aimed at replicating specific statistical features encountered in real-world networks. However, it is rarely…

Physics and Society · Physics 2012-06-11 Stefano Cardanobile , Volker Pernice , Moritz Deger , Stefan Rotter

Given partial measurements of a time-varying graph signal, we propose an algorithm to simultaneously estimate both the underlying graph topology and the missing measurements. The proposed algorithm operates by training an interpretable…

Signal Processing · Electrical Eng. & Systems 2024-07-17 Subbareddy Batreddy , Pushkal Mishra , Yaswanth Kakarla , Aditya Siripuram

A wide range of models have been proposed for Graph Generative Models, necessitating effective methods to evaluate their quality. So far, most techniques use either traditional metrics based on subgraph counting, or the representations of…

Machine Learning · Statistics 2022-06-14 Hamed Shirzad , Kaveh Hassani , Danica J. Sutherland

Graphs may be used to represent many different problem domains -- a concrete example is that of detecting communities in social networks, which are represented as graphs. With big data and more sophisticated applications becoming widespread…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-03 Miguel E. Coimbra , Alexandre P. Francisco , Luis Veiga

As a fundamental structure in real-world networks, in addition to graph topology, communities can also be reflected by abundant node attributes. In attributed community detection, probabilistic generative models (PGMs) have become the…

Social and Information Networks · Computer Science 2022-05-31 Ren Ren , Jinliang Shao , Adrian N. Bishop , Wei Xing Zheng

We delve into the issue of node classification within graphs, specifically reevaluating the concept of neighborhood aggregation, which is a fundamental component in graph neural networks (GNNs). Our analysis reveals conceptual flaws within…

Machine Learning · Computer Science 2024-07-23 Mounir Ghogho

When re-structuring patient cohorts into so-called population graphs, initially independent data points can be incorporated into one interconnected graph structure. This population graph can then be used for medical downstream tasks using…

Social and Information Networks · Computer Science 2023-09-20 Tamara T. Mueller , Sophie Starck , Leonhard F. Feiner , Kyriaki-Margarita Bintsi , Daniel Rueckert , Georgios Kaissis

We develop random graph models where graphs are generated by connecting not only pairs of vertices by edges but also larger subsets of vertices by copies of small atomic subgraphs of arbitrary topology. This allows the for the generation of…

Statistics Theory · Mathematics 2021-04-21 Anatol E. Wegner , Sofia Olhede

Graphical models have been widely applied in solving distributed inference problems in sensor networks. In this paper, the problem of coordinating a network of sensors to train a unique ensemble estimator under communication constraints is…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-17 Haipeng Zheng , Sanjeev R. Kulkarni , H. Vincent Poor

We consider a graphical model where a multivariate normal vector is associated with each node of the underlying graph and estimate the graphical structure. We minimize a loss function obtained by regressing the vector at each node on those…

Machine Learning · Statistics 2017-09-19 Xingqi Du , Subhashis Ghosal

We investigate the widely encountered problem of detecting communities in multiplex networks, such as social networks, with an unknown arbitrary heterogeneous structure. To improve detectability, we propose a generative model that leverages…

Social and Information Networks · Computer Science 2019-11-27 Yuming Huang , Ashkan Panahi , Hamid Krim , Liyi Dai