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Recent achievements in implantable brain-computer interfaces (iBCIs) have demonstrated the potential to decode cognitive and motor behaviors with intracranial brain recordings; however, individual physiological and electrode implantation…

Neurons and Cognition · Quantitative Biology 2025-06-17 Di Wu , Linghao Bu , Yifei Jia , Lu Cao , Siyuan Li , Siyu Chen , Yueqian Zhou , Sheng Fan , Wenjie Ren , Dengchang Wu , Kang Wang , Yue Zhang , Yuehui Ma , Jie Yang , Mohamad Sawan

The main focus of this work is a novel framework for the joint reconstruction and segmentation of parallel MRI (PMRI) brain data. We introduce an image domain deep network for calibrationless recovery of undersampled PMRI data. The proposed…

Image and Video Processing · Electrical Eng. & Systems 2021-02-03 Aniket Pramanik , Mathews Jacob

Deep learning is emerging as a new paradigm for solving inverse imaging problems. However, the deep learning methods often lack the assurance of traditional physics-based methods due to the lack of physical information considerations in…

Image and Video Processing · Electrical Eng. & Systems 2020-07-20 Dongdong Chen , Mike E. Davies

Computer-aided assessment of physical rehabilitation entails evaluation of patient performance in completing prescribed rehabilitation exercises, based on processing movement data captured with a sensory system. Despite the essential role…

Machine Learning · Computer Science 2020-01-24 Y. Liao , A. Vakanski , M. Xian

Functional Magnetic Resonance Imaging (fMRI) is a neuroimaging technique with pivotal importance due to its scientific and clinical applications. As with any widely used imaging modality, there is a need to ensure the quality of the same,…

Image and Video Processing · Electrical Eng. & Systems 2020-09-29 David Calhas , Rui Henriques

Segmenting deep brain structures from magnetic resonance images is important for patient diagnosis, surgical planning, and research. Most current state-of-the-art solutions follow a segmentation-by-registration approach, where subject MRIs…

Image and Video Processing · Electrical Eng. & Systems 2022-05-20 Mehri Baniasadi , Mikkel V. Petersen , Jorge Goncalves , Andreas Horn , Vanja Vlasov , Frank Hertel , Andreas Husch

Deep neural networks (DNNs) have already achieved great success in a lot of application areas and brought profound changes to our society. However, it also raises new security problems, among which how to protect the intellectual property…

Cryptography and Security · Computer Science 2022-11-02 Hanzhou Wu

There is a broad need in the neuroscience community to understand and visualize large-scale recordings of neural activity, big data acquired by tens or hundreds of electrodes simultaneously recording dynamic brain activity over minutes to…

Neurons and Cognition · Quantitative Biology 2015-11-24 Bingni W. Brunton , Lise A. Johnson , Jeffrey G. Ojemann , J. Nathan Kutz

Segmentation is one of the most important tasks in MRI medical image analysis and is often the first and the most critical step in many clinical applications. In brain MRI analysis, head segmentation is commonly used for measuring and…

Image and Video Processing · Electrical Eng. & Systems 2022-08-11 Haleh Akrami , Wenhui Cui , Anand A Joshi , Richard M. Leahy

Electroencephalography (EEG) data present unique modeling challenges because recordings vary in length, exhibit very low signal to noise ratios, differ significantly across participants, drift over time within sessions, and are rarely…

Signal Processing · Electrical Eng. & Systems 2026-01-05 Shahar Ain Kedem , Itamar Zimerman , Eliya Nachmani

Empirically observed time series in physics, biology, or medicine, are commonly generated by some underlying dynamical system (DS) which is the target of scientific interest. There is an increasing interest to harvest machine learning…

Machine Learning · Computer Science 2022-07-07 Daniel Kramer , Philine Lou Bommer , Carlo Tombolini , Georgia Koppe , Daniel Durstewitz

Real-world multivariate time series, particularly in critical infrastructure such as electrical power grids, are often corrupted by noise and anomalies that degrade the performance of downstream tasks. Standard data cleaning approaches…

Artificial Intelligence · Computer Science 2026-03-13 David Baumgartner , Helge Langseth , Heri Ramampiaro

Neurophysiological time series, such as electromyographic signal and intracortical recordings, are typically composed of many individual spiking sources, the recovery of which can give fundamental insights into the biological system of…

Machine Learning · Computer Science 2021-10-18 Alexander Kenneth Clarke , Dario Farina

An important task in image processing and neuroimaging is to extract quantitative information from the acquired images in order to make observations about the presence of disease or markers of development in populations. Having a…

Computer Vision and Pattern Recognition · Computer Science 2018-11-27 Camilo Bermudez , Andrew J. Plassard , Larry T. Davis , Allen T. Newton , Susan M Resnick , Bennett A. Landman

We present a comprehensive analysis of deep learning approaches for Electronic Health Record (EHR) time-series imputation, examining how architectural and framework biases combine to influence model performance. Our investigation reveals…

Machine Learning · Computer Science 2025-02-05 Linglong Qian , Tao Wang , Jun Wang , Hugh Logan Ellis , Robin Mitra , Richard Dobson , Zina Ibrahim

Deep neural networks (DNNs) achieve remarkable predictive performance but remain difficult to interpret, largely due to overparameterization that obscures the minimal structure required for interpretation. Here we introduce DeepIn, a…

Methodology · Statistics 2026-03-26 Zhiyao Tan , Liu Li , Huazhen Lin

Modeling continuous dynamical systems from discretely sampled observations is a fundamental problem in data science. Often, such dynamics are the result of non-local processes that present an integral over time. As such, these systems are…

In recent years, the number of papers on Alzheimer's disease classification has increased dramatically, generating interesting methodological ideas on the use machine learning and feature extraction methods. However, practical impact is…

Recent successes of Deep Neural Networks (DNNs) in a variety of research tasks, however, heavily rely on the large amounts of labeled samples. This may require considerable annotation cost in real-world applications. Fortunately, active…

Machine Learning · Computer Science 2020-09-08 Qiang Liu , Zhaocheng Liu , Xiaofang Zhu , Yeliang Xiu

Deep neural networks (DNN) have shown remarkable success in the classification of physiological signals. In this study we propose a method for examining to what extent does a DNN's performance rely on rediscovering existing features of the…

Machine Learning · Statistics 2020-08-26 Tom Beer , Bar Eini-Porat , Sebastian Goodfellow , Danny Eytan , Uri Shalit