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In 3D nematic liquid crystals, disclination lines have a range of geometric structures. Locally, they may resemble $+1/2$ or $-1/2$ defects in 2D nematic phases, or they may have 3D twist. Here, we analyze the structure in terms of the…

Soft Condensed Matter · Physics 2021-03-08 Cheng Long , Xingzhou Tang , Robin L. B. Selinger , Jonathan V. Selinger

The hydrodynamic theory of active nematics has been often used to describe the spatio-temporal dynamics of cell flows and motile topological defects within soft confluent tissues. Those theories, however, often rely on the assumption that…

Soft Condensed Matter · Physics 2023-08-15 Ioannis Hadjifrangiskou , Liam J. Ruske , Julia M. Yeomans

We study how confinement transforms the chaotic dynamics of bulk microtubule-based active nematics into regular spatiotemporal patterns. For weak confinements, multiple continuously nucleating and annihilating topological defects…

Morphodynamic equations governing the behaviour of active nematic fluids on deformable curved surfaces are constructed in the large deformation limit. Emphasis is placed on the formulation of objective rates that account for normal…

Soft Condensed Matter · Physics 2023-02-22 Sami C. Al-Izzi , Richard G. Morris

Cultured stem cells have become a standard platform not only for regenerative medicine and developmental biology but also for biophysical studies. Yet, the characterization of cultured stem cells at the level of morphology and macroscopic…

Soft Condensed Matter · Physics 2022-06-23 Kyogo Kawaguchi , Ryoichiro Kageyama , Masaki Sano

The spontaneous creation of disclinations is a defining characteristic of active nematics, which is rarely observed in equilibrium systems or other active matter systems. Thus, understanding the mechanics of disclinations is crucial for…

Soft Condensed Matter · Physics 2025-07-01 Yingyou Ma , Christopher Amey , Aparna Baskaran , Michael F. Hagan

We provide a minimal model for an active nematic film in contact with both a solid substrate and a passive isotropic fluid, and explore its dynamics in one and two dimensions using a combination of hybrid Lattice Boltzmann simulations and…

Soft Condensed Matter · Physics 2017-02-16 Matthew L. Blow , Marco Aqil , Benno Liebchen , Davide Marenduzzo

We examine the scaling with activity of the emergent length scales that control the nonequilibrium dynamics of an active nematic liquid crystal, using two popular hydrodynamic models that have been employed in previous studies. In both…

Soft Condensed Matter · Physics 2016-09-05 E. J. Hemingway , P. Mishra , M. C. Marchetti , S. M. Fielding

Active materials are those in which individual, uncoordinated local stresses drive the material out of equilibrium on a global scale. Examples of such assemblies can be seen across scales from schools of fish to the cellular cytoskeleton…

Soft Condensed Matter · Physics 2022-09-30 Nitin Kumar , Rui Zhang , Steven A. Redford , Juan J. de Pablo , Margaret L. Gardel

Active matter is characterized by its ability to induce motion by self-generated stress. In the case of a solid, such motion can lead to shape transformations. The stress-generating components can be anisotropic endowing the material with…

Soft Condensed Matter · Physics 2022-05-16 D. J. G. Pearce , S. Gat , G. Livne , A. Bernheim-Groswasser , K. Kruse

Topological defects are one of the most conspicuous features of liquid crystals. In two dimensional nematics, they have been shown to behave effectively as particles with both, charge and orientation, which dictate their interactions. Here,…

Soft Condensed Matter · Physics 2021-07-14 Daniel J. G. Pearce , Karsten Kruse

Recent experiments in various cell types have shown that two-dimensional tissues often display local nematic order, with evidence of extensile stresses manifest in the dynamics of topological defects. Using a mesoscopic model where tissue…

Soft Condensed Matter · Physics 2021-03-30 Farzan Vafa , Mark J. Bowick , Boris I. Shraiman , M. Cristina Marchetti

We investigate the turbulent dynamics of a two-dimensional active nematic liquid crystal con- strained on a curved surface. Using a combination of hydrodynamic and particle-based simulations, we demonstrate that the fundamental structural…

Soft Condensed Matter · Physics 2019-05-01 D. J. G. Pearce , Perry W. Ellis , Alberto Fernandez-Nieves , L. Giomi

We show that confining extensile nematics in 3D channels leads to the emergence of two self-organized flow states with nonzero helicity. The first is a pair of braided anti-parallel streams - this double helix occurs when the activity is…

Soft Condensed Matter · Physics 2024-04-12 Ryan Keogh , Santhan Chandragiri , Benjamin Loewe , Tapio Ala-Nissila , Sumesh Thampi , Tyler N. Shendruk

We use active nematohydrodynamics to study the flow of an active fluid in a 3D microchannel, finding a transition between active turbulence and regimes where there is a net flow along the channel. We show that the net flow is only possible…

Soft Condensed Matter · Physics 2020-10-07 Santhan Chandragiri , Amin Doostmohammadi , Julia M. Yeomans , Sumesh P. Thampi

We present a framework to take new measurements in nematic systems that contain active elements such as molecular motors. Spatio-temporal fields of stress, traction, velocity, pressure, and forces are estimated jointly from microscopy…

Soft Condensed Matter · Physics 2024-12-02 Aleix Boquet-Pujadas , Jérôme Hardouïn , Junhao Wen , Jordi Ignés-Mullol , Francesc Sagués

Topological defects in systems with liquid-crystalline order are crucial in determining their large-scale properties. In active systems, they are known to have properties impossible at equilibrium: for example, $+1/2$ defects in…

Soft Condensed Matter · Physics 2026-02-17 Giacomo Marco La Montagna , Sumeja Burekovic , Ananyo Maitra , Cesare Nardini

Motivated by the unique physical properties of {\em biological active matter}, e.g., cytoskeletal dynamics in eukaryotic cells, we set up {\em effective} two-dimensional (2d) coarse-grained hydrodynamic equations for the dynamics of thin…

Statistical Mechanics · Physics 2011-06-08 Niladri Sarkar , Abhik Basu

We perform dynamical simulations of a two-dimensional active nematic fluid in coexistence with an isotropic fluid. Drops of active nematic become elongated, and an effective anchoring develops at the nematic-isotropic interface. The…

Soft Condensed Matter · Physics 2014-12-17 Matthew L. Blow , Sumesh P. Thampi , Julia M. Yeomans

The interplay between active matter and its environment is central to understanding emergent behavior in biological and synthetic systems. Here, we show that coupling active nematic flows to small-amplitude deformations of a compliant…

Soft Condensed Matter · Physics 2026-01-19 Varun Venkatesh , Amin Doostmohammadi
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