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Deep neural networks can be powerful tools, but require careful application-specific design to ensure that the most informative relationships in the data are learnable. In this paper, we apply deep neural networks to the nonlinear…

Machine Learning · Computer Science 2019-12-04 Matthew A. Wright , Simon F. G. Ehlers , Roberto Horowitz

Brain networks characterize complex connectivities among brain regions as graph structures, which provide a powerful means to study brain connectomes. In recent years, graph neural networks have emerged as a prevalent paradigm of learning…

Machine Learning · Computer Science 2022-06-10 Yi Yang , Yanqiao Zhu , Hejie Cui , Xuan Kan , Lifang He , Ying Guo , Carl Yang

The critical brain hypothesis posits that neural circuitry operates near criticality to reap the computational benefits of accessing a wide range of timescales. The theory of critical phenomena generally predicts heavy-tailed (power-law)…

Neurons and Cognition · Quantitative Biology 2025-12-23 Jacob T. Crosser , Braden A. W. Brinkman

One of the most important properties of neural networks is the clustering of local minima of the loss function near the global minimum, enabling efficient training. Though generative models implemented on quantum computers are known to be…

Quantum Physics · Physics 2023-01-13 Eric R. Anschuetz

We consider restricted Boltzmann machine (RBMs) trained over an unstructured dataset made of blurred copies of definite but unavailable ``archetypes'' and we show that there exists a critical sample size beyond which the RBM can learn…

Disordered Systems and Neural Networks · Physics 2021-09-02 Elena Agliari , Francesco Alemanno , Adriano Barra , Giordano De Marzo

For constructing neuronal network models computational neuroscientists have access to wide-ranging anatomical data that nevertheless tend to cover only a fraction of the parameters to be determined. Finding and interpreting the most…

The proliferation of deep neural networks in various domains has seen an increased need for interpretability of these models. Preliminary work done along this line and papers that surveyed such, are focused on high-level representation…

Computation and Language · Computer Science 2022-08-17 Hassan Sajjad , Nadir Durrani , Fahim Dalvi

In this essay we elaborate on recent evidence demonstrating the presence of a second order phase transition in human brain dynamics and discuss its consequences for theoretical approaches to brain function. We review early evidence of…

Neurons and Cognition · Quantitative Biology 2015-06-12 Enzo Tagliazucchi , Dante R. Chialvo

The human brain is a complex dynamical system which displays a wide range of macroscopic and mesoscopic patterns of neural activity, whose mechanistic origin remains poorly understood. Whole-brain modelling allows us to explore candidate…

Neurons and Cognition · Quantitative Biology 2025-04-25 Cristiana Dimulescu , Ronja Strömsdörfer , Agnes Flöel , Klaus Obermayer

A bump attractor network is a model that implements a competitive neuronal process emerging from a spike pattern related to an input source. Since the bump network could behave in many ways, this paper explores some critical limits of the…

Neural and Evolutionary Computing · Computer Science 2020-03-31 Alberto Arturo Vergani , Christian Robert Huyck

We propose a generative model for single-channel EEG that incorporates the constraints experts actively enforce during visual scoring. The framework takes the form of a dynamic Bayesian network with depth in both the latent variables and…

Machine Learning · Computer Science 2021-03-04 Carlos A. Loza , Laura L. Colgin

Neuronal avalanches are a novel mode of activity in neuronal networks, experimentally found in vitro and in vivo, and exhibit a robust critical behaviour: These avalanches are characterized by a power law distribution for the size and…

Neurons and Cognition · Quantitative Biology 2012-04-02 Lucilla de Arcangelis , Hans J. Herrmann

In neuroscience, functional brain connectivity describes the connectivity between brain regions that share functional properties. Neuroscientists often characterize it by a time series of covariance matrices between functional measurements…

Methodology · Statistics 2019-07-09 Zhenhua Lin , Dehan Kong , Qiang Sun

Dynamic processes on networks are fundamental to understanding modern-day phenomena such as information diffusion and opinion polarization on the internet or epidemics spreading through society. However, such processes are notoriously…

Physics and Society · Physics 2025-07-15 Noam Abadi , Franco Ruzzenenti

Neural systems process information in a dynamical regime between silence and chaotic dynamics. This has lead to the criticality hypothesis which suggests that neural systems reach such a state by self-organizing towards the critical point…

Disordered Systems and Neural Networks · Physics 2021-03-10 Stefan Landmann , Lorenz Baumgarten , Stefan Bornholdt

In this study, we propose a novel data-driven reduced-order model for complex dynamics, including nonlinear, multi-attractor, multi-frequency, and multiscale behaviours. The starting point is a fully automatable cluster-based network model…

Fluid Dynamics · Physics 2024-03-04 Chang Hou , Nan Deng , Bernd R. Noack

Distributed networks of brain areas interact with one another in a time-varying fashion to enable complex cognitive and sensorimotor functions. Here we use novel network analysis algorithms to test the recruitment and integration of…

Neurons and Cognition · Quantitative Biology 2014-03-25 Danielle S. Bassett , Muzhi Yang , Nicholas F. Wymbs , Scott T. Grafton

Brain decoding involves the determination of a subject's cognitive state or an associated stimulus from functional neuroimaging data measuring brain activity. In this setting the cognitive state is typically characterized by an element of a…

Machine Learning · Statistics 2015-04-14 Nicole Croteau , Farouk S. Nathoo , Jiguo Cao , Ryan Budney

The quintessential property of neuronal systems is their intensive patterns of selective synaptic connections. The current work describes a physics-based approach to neuronal shape modeling and synthesis and its consideration for the…

Neurons and Cognition · Quantitative Biology 2009-11-10 Luciano da Fontoura Costa , Regina Celia Coelho

An essential requirement for the representation of functional patterns in complex neural networks, such as the mammalian cerebral cortex, is the existence of stable network activations within a limited critical range. In this range, the…

Neurons and Cognition · Quantitative Biology 2008-02-19 Marcus Kaiser , Matthias Goerner , Claus C. Hilgetag
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