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Biochemical reaction networks frequently consist of species evolving on multiple timescales. Stochastic simulations of such networks are often computationally challenging and therefore various methods have been developed to obtain sensible…

Molecular Networks · Quantitative Biology 2017-04-20 Jae Kyoung Kim , Grzegorz A. Rempala , Hye-Won Kang

Latent class model (LCM), which is a finite mixture of different categorical distributions, is one of the most widely used models in statistics and machine learning fields. Because of its non-continuous nature and the flexibility in shape,…

Machine Learning · Statistics 2021-03-23 Hao Chen , Lanshan Han , Alvin Lim

Markov chains are an important tool for modelling and evaluating systems in computer science, economics, biology and numerous other fields. Thus, approximating Markov chains is a useful tool for decreasing the computational effort needed…

Probability · Mathematics 2025-07-16 Patrick Sonnentag

We develop a novel algorithm to construct a congestion-approximator with polylogarithmic quality on a capacitated, undirected graph in nearly-linear time. Our approach is the first *bottom-up* hierarchical construction, in contrast to…

Data Structures and Algorithms · Computer Science 2025-01-14 Jason Li , Satish Rao , Di Wang

We propose a randomized lattice algorithm for approximating multivariate periodic functions over the $d$-dimensional unit cube from the weighted Korobov space with mixed smoothness $\alpha > 1/2$ and product weights…

Numerical Analysis · Mathematics 2025-08-26 Mou Cai , Takashi Goda , Yoshihito Kazashi

In his influential work Choquet systematically studied capacities on Boolean algebras in a topological space, and gave a probabilistic interpretation for completely monotone (and completely alternating) capacities. Beyond complete…

Probability · Mathematics 2011-05-10 Motoya Machida

The simplest, and most common, stochastic model for population processes, including those from biochemistry and cell biology, are continuous time Markov chains. Simulation of such models is often relatively straightforward as there are…

Probability · Mathematics 2012-03-01 David F. Anderson , Masanori Koyama

The Matrix-based Renyi's entropy enables us to directly measure information quantities from given data without the costly probability density estimation of underlying distributions, thus has been widely adopted in numerous statistical…

Machine Learning · Statistics 2022-05-17 Yuxin Dong , Tieliang Gong , Shujian Yu , Chen Li

In this paper, we study the problem of determining a minimum state probabilistic finite state machine capable of generating statistically identical symbol sequences to samples provided. This problem is qualitatively similar to the classical…

Formal Languages and Automata Theory · Computer Science 2017-02-28 Elisabeth Paulson , Christopher Griffin

We develop computational methods for approximating the solution of a linear multi-term matrix equation in low rank. We follow an alternating minimization framework, where the solution is represented as a product of two matrices, and…

Numerical Analysis · Mathematics 2020-06-16 Kookjin Lee , Howard C. Elman , Catherine E. Powell , Dongeun Lee

Given a graph, the general problem to cover the maximum number of vertices by a collection of vertex-disjoint long paths seemingly escapes from the literature. A path containing at least $k$ vertices is considered long. When $k \le 3$, the…

Data Structures and Algorithms · Computer Science 2022-08-08 Mingyang Gong , Brett Edgar , Jing Fan , Guohui Lin , Eiji Miyano

We present an approximation algorithm that takes a pool of pre-trained models as input and produces from it a cascaded model with similar accuracy but lower average-case cost. Applied to state-of-the-art ImageNet classification models, this…

Machine Learning · Computer Science 2018-02-22 Matthew Streeter

We propose a new technique for constructing low-rank approximations of matrices that arise in kernel methods for machine learning. Our approach pairs a novel automatically constructed analytic expansion of the underlying kernel function…

Machine Learning · Computer Science 2022-02-09 John Paul Ryan , Anil Damle

In recent years, several algorithms, which approximate matrix decomposition, have been developed. These algorithms are based on metric conservation features for linear spaces of random projection types. We show that an i.i.d sub-Gaussian…

Numerical Analysis · Mathematics 2016-02-11 Yariv Aizenbud , Amir Averbuch

We study a quantity called discrete layered entropy, which approximates the Shannon entropy within a logarithmic gap. Compared to the Shannon entropy, the discrete layered entropy is piecewise linear, approximates the expected length of the…

Information Theory · Computer Science 2026-01-27 Cheuk Ting Li

First, we study geometric variants of the standard set cover motivated by assignment of directional antenna and shipping with deadlines, providing the first known polynomial-time exact solutions. Next, we consider the following general…

Computational Complexity · Computer Science 2009-09-30 Piotr Berman , Marek Karpinski , Andrzej Lingas

In this paper, we consider the generalized low rank approximation of the correlation matrices problem which arises in the asset portfolio. We first characterize the feasible set by using the Gramian representation together with a special…

Numerical Analysis · Mathematics 2018-12-12 Xuefeng Duan , Jianchao Bai , Maojun Zhang , Xinjun Zhang

We develop a corrective mechanism for neural network approximation: the total available non-linear units are divided into multiple groups and the first group approximates the function under consideration, the second group approximates the…

Machine Learning · Computer Science 2020-06-23 Guy Bresler , Dheeraj Nagaraj

The capacity of 1-D constraints is given by the entropy of a corresponding stationary maxentropic Markov chain. Namely, the entropy is maximized over a set of probability distributions, which is defined by some linear requirements. In this…

Information Theory · Computer Science 2009-09-29 Ido Tal , Ron M. Roth

Maximum likelihood estimation of energy-based models is a challenging problem due to the intractability of the log-likelihood gradient. In this work, we propose learning both the energy function and an amortized approximate sampling…

Machine Learning · Computer Science 2019-05-29 Rithesh Kumar , Sherjil Ozair , Anirudh Goyal , Aaron Courville , Yoshua Bengio
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