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In this study, we focus on the graph representation learning (a.k.a. network embedding) in attributed graphs. Different from existing embedding methods that treat the incorporation of graph structure and semantic as the simple combination…

Social and Information Networks · Computer Science 2023-05-12 Meng Qin

Neighborhood selection is a widely used method used for estimating the support set of sparse precision matrices, which helps determine the conditional dependence structure in undirected graphical models. However, reporting only point…

Methodology · Statistics 2023-12-29 Yiling Huang , Snigdha Panigrahi , Walter Dempsey

Graph Neural Networks (GNNs) are a predominant method for graph representation learning. However, beyond subgraph frequency estimation, their application to network motif significance-profile (SP) prediction remains under-explored, with no…

Machine Learning · Computer Science 2025-07-11 Pedro C. Vieira , Miguel E. P. Silva , Pedro Manuel Pinto Ribeiro

Heterogeneous Information Networks (HINs), which consist of various types of nodes and edges, have recently demonstrated excellent performance in graph mining. However, most existing heterogeneous graph neural networks (HGNNs) ignore the…

Machine Learning · Computer Science 2024-11-20 Yige Zhao , Jianxiang Yu , Yao Cheng , Chengcheng Yu , Yiding Liu , Xiang Li , Shuaiqiang Wang

Estimating the probabilities of linkages in a network has gained increasing interest in recent years. One popular model for network analysis is the exchangeable graph model (ExGM) characterized by a two-dimensional function known as a…

Methodology · Statistics 2018-09-05 Yi Su , Raymond K. W. Wong , Thomas C. M. Lee

Graphical network inference is used in many fields such as genomics or ecology to infer the conditional independence structure between variables, from measurements of gene expression or species abundances for instance. In many practical…

Methodology · Statistics 2018-03-22 Geneviève Robin , Christophe Ambroise , Stéphane Robin

Graph Neural Networks (GNNs) have exhibited remarkable efficacy in learning from multi-view graph data. In the framework of multi-view graph neural networks, a critical challenge lies in effectively combining diverse views, where each view…

Machine Learning · Computer Science 2026-05-18 Junyu Chen , Long Shi , Badong Chen

Detecting anomalies in dynamic graphs is a vital task, with numerous practical applications in areas such as security, finance, and social media. Previous network embedding based methods have been mostly focusing on learning good node…

Machine Learning · Computer Science 2020-05-26 Lei Cai , Zhengzhang Chen , Chen Luo , Jiaping Gui , Jingchao Ni , Ding Li , Haifeng Chen

The Gaussian graphical model (GGM) incorporates an undirected graph to represent the conditional dependence between variables, with the precision matrix encoding partial correlation between pair of variables given the others. To achieve…

Methodology · Statistics 2023-07-03 Yueqi Qian , Xianghong Hu , Can Yang

The (variational) graph auto-encoder is widely used to learn representations for graph-structured data. However, the formation of real-world graphs is a complicated and heterogeneous process influenced by latent factors. Existing encoders…

Machine Learning · Computer Science 2024-07-17 Di Fan , Chuanhou Gao

We consider a graphical model where a multivariate normal vector is associated with each node of the underlying graph and estimate the graphical structure. We minimize a loss function obtained by regressing the vector at each node on those…

Machine Learning · Statistics 2017-09-19 Xingqi Du , Subhashis Ghosal

We examine two fundamental tasks associated with graph representation learning: link prediction and semi-supervised node classification. We present a novel autoencoder architecture capable of learning a joint representation of both local…

Machine Learning · Computer Science 2019-03-12 Phi Vu Tran

Spectral graph convolutional neural networks (GCNNs) have been producing encouraging results in graph classification tasks. However, most spectral GCNNs utilize fixed graphs when aggregating node features, while omitting edge feature…

Computer Vision and Pattern Recognition · Computer Science 2022-10-06 Yang Yi , Xuequan Lu , Shang Gao , Antonio Robles-Kelly , Yuejie Zhang

Signed Graph Neural Networks (SGNNs) are vital for analyzing complex patterns in real-world signed graphs containing positive and negative links. However, three key challenges hinder current SGNN-based signed graph representation learning:…

Machine Learning · Computer Science 2023-10-17 Zeyu Zhang , Shuyan Wan , Sijie Wang , Xianda Zheng , Xinrui Zhang , Kaiqi Zhao , Jiamou Liu , Dong Hao

Generative models of graphs are well-known, but many existing models are limited in scalability and expressivity. We present a novel sequential graphical variational autoencoder operating directly on graphical representations of data. In…

Machine Learning · Computer Science 2019-12-18 Bowen Jing , Ethan A. Chi , Jillian Tang

Variational Autoencoders (VAEs) are powerful in data representation inference, but it cannot learn relations between features with its vanilla form and common variations. The ability to capture relations within data can provide the much…

Machine Learning · Computer Science 2020-07-23 Chen Wang , Chengyuan Deng , Vladimir Ivanov

Statistical models are central to machine learning with broad applicability across a range of downstream tasks. The models are controlled by free parameters that are typically estimated from data by maximum-likelihood estimation or…

Machine Learning · Computer Science 2023-08-16 Vaidotas Simkus , Benjamin Rhodes , Michael U. Gutmann

In this paper, we first propose a graph neural network encoding method for multiobjective evolutionary algorithm to handle the community detection problem in complex attribute networks. In the graph neural network encoding method, each edge…

Neural and Evolutionary Computing · Computer Science 2021-01-06 Jianyong Sun , Wei Zheng , Qingfu Zhang , Zongben Xu

Slow feature analysis (SFA) is a method for extracting slowly varying features from a quickly varying multidimensional signal. An open source Matlab-implementation sfa-tk makes SFA easily useable. We show here that under certain…

Machine Learning · Statistics 2009-12-08 Wolfgang Konen

Graph Neural Networks have become one of the indispensable tools to learn from graph-structured data, and their usefulness has been shown in wide variety of tasks. In recent years, there have been tremendous improvements in architecture…

Machine Learning · Statistics 2021-11-15 Sunil Kumar Maurya , Xin Liu , Tsuyoshi Murata