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Related papers: Petri nets in epidemiology

200 papers

The simplest epidemiologic model composed by mutually exclusive compartments SIR (susceptible-infected-susceptible) is presented to describe a reality. From health concerns to situations related with marketing, informatics or even…

Physics and Society · Physics 2016-11-09 Helena Sofia Rodrigues

This paper considers a stochastic SIR (susceptible$\to$infective$\to$removed) epidemic model in which individuals may make infectious contacts in two ways, both within `households' (which for ease of exposition are assumed to have equal…

Probability · Mathematics 2015-03-13 Frank Ball , David Sirl , Pieter Trapman

Metapopulation models are commonly used in ecology, evolution, and epidemiology. These models usually entail homogeneity assumptions within patches and study networks of migration between patches to generate insights into conservation of…

Populations and Evolution · Quantitative Biology 2025-06-06 Diepreye Ayabina , Hasan Sevil , Adam Kleczkowski , M. Gabriela M. Gomes

Infection dynamics have been studied extensively on complex networks, yielding insight into the effects of heterogeneity in contact patterns on disease spread. Somewhat separately, metapopulations have provided a paradigm for modeling…

Physics and Society · Physics 2013-08-09 Jason Hindes , Sarabjeet Singh , Christopher R. Myers , David J. Schneider

A statistical model assuming a preferential attachment network, which is generated by adding nodes sequentially according to a few simple rules, usually describes real-life networks better than a model assuming, for example, a Bernoulli…

Computation · Statistics 2018-10-01 Clement Lee , Andrew Garbett , Darren J. Wilkinson

The reproduction number of deterministic models is an essential quantity to predict whether an epidemic will spread or die out. Thresholds for disease extinction contribute crucial knowledge on disease control, elimination, and mitigation…

Populations and Evolution · Quantitative Biology 2013-08-08 Ling Xue , Caterina Scoglio

It is a fundamental question in epidemiology to estimate, model and predict the growth rate of a pandemic. Analogously, analysing the diffusion of innovation, (fake) news, memes, and rumours is of key importance in the social sciences. The…

Probability · Mathematics 2026-04-30 Zylan Benjert , Júlia Komjáthy , Johannes Lengler , John Lapinskas , Ulysse Schaller

In this paper, we study the spread of a classical SIR process on a two-layer random network, where the first layer represents the households, while the second layer models the contacts outside the households by a random scale-free graph. We…

Populations and Evolution · Quantitative Biology 2024-03-01 Ágnes Backhausz , Edit Bognár , Villő Csiszár , Damján Tárkányi , András Zempléni

We study the diffusion of epidemics on networks that are partitioned into local communities. The gross structure of hierarchical networks of this kind can be described by a quotient graph. The rationale of this approach is that individuals…

Social and Information Networks · Computer Science 2016-01-19 Stefano Bonaccorsi , Stefania Ottaviano , Delio Mugnolo , Francesco De Pellegrini

We study an infection-age structured epidemic model in which both the infectivity and the rate of loss of immunity depend on the time-since-infection. The model can be equivalently viewed as a nonlinear renewal equation for the incidence of…

Dynamical Systems · Mathematics 2025-11-13 Francesca Scarabel , Harry Coldwell , Tyler Cassidy

Compartmental epidemic models with dynamics that evolve over a graph network have gained considerable importance in recent years but analysis of these models is in general difficult due to their complexity. In this paper, we develop two…

Populations and Evolution · Quantitative Biology 2023-05-31 Sei Zhen Khong , Lanlan Su

Social contact matrices are essential tools in infectious disease epidemiology as they quantify close-range human contact patterns which directly drive the transmission of airborne infectious diseases. In this work we propose a Bayesian…

Methodology · Statistics 2026-05-11 Shozen Dan , David A. van Dyk , Zhi Ling , Swapnil Mishra , Oliver Ratmann

During an epidemic, the infectiousness of infected individuals is known to depend on the time since the individual was infected, that is called the age of infection. Here we study the parameter identifiability of the Kermack-McKendrick…

Analysis of PDEs · Mathematics 2023-05-10 Jacques Demongeot , Quentin Griette , Yvon Maday , Pierre Magal

Infectious disease superspreading caused by heterogeneity in contact behavior has been observed to be an important determinant of epidemic dynamics and size in both empirical and theoretical settings. However, it has also been observed that…

Populations and Evolution · Quantitative Biology 2026-01-27 Ari S. Freedman , Bjarke F. Nielsen , Maximillian M. Nguyen , Laurent Hébert-Dufresne , Simon A. Levin

A very large class of ODE epidemic models (2.2) discussed in this paper enjoys the property of admitting also an integral renewal formulation, with respect to an "age of infection kernel" a(t) which has a matrix exponential form (3.2). We…

Populations and Evolution · Quantitative Biology 2023-07-12 Florin Avram , Rim Adenane , Dan Goreac , Andrei Halanay

We continue recent attempts to put together concepts and results of Chemical Reaction Networks theory (CRNT) and Mathematical Epidemiology (ME), for solving problems of stability of positive ODEs. We provide first an elegant CRN-flavored…

Molecular Networks · Quantitative Biology 2026-04-21 Florin Avram , Rim Adenane , Andrei-Dan Halanay

This paper is concerned with a nonlocal dispersal susceptible-infected-susceptible (SIS) epidemic model with Dirichlet boundary condition, where the rates of disease transmission and recovery are assumed to be spatially heterogeneous. We…

Analysis of PDEs · Mathematics 2016-01-21 Fei-Ying Yang , Wan-Tong Li

Epidemic propagation on networks represents an important departure from traditional massaction models. However, the high-dimensionality of the exact models poses a challenge to both mathematical analysis and parameter inference. By using…

Quantitative Methods · Quantitative Biology 2023-02-07 István Z. Kiss , Luc Berthouze , Wasiur R. KhudaBukhsh

The study of social networks, and in particular the spread of disease on networks, has attracted considerable recent attention in the physics community. In this paper, we show that a large class of standard epidemiological models, the…

Statistical Mechanics · Physics 2009-11-07 M. E. J. Newman

Models with several levels of mixing (households, workplaces), as well as various corresponding formulations for R0, have been proposed in the literature. However, little attention has been paid to the impact of the distribution of the…

Physics and Society · Physics 2024-11-21 Vincent Bansaye , François Deslandes , Madeleine Kubasch , Elisabeta Vergu