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Integrating image and text data through multi-modal learning has emerged as a new approach in medical imaging research, following its successful deployment in computer vision. While considerable efforts have been dedicated to establishing…

Computer Vision and Pattern Recognition · Computer Science 2024-09-09 Fereshteh Shakeri , Yunshi Huang , Julio Silva-Rodríguez , Houda Bahig , An Tang , Jose Dolz , Ismail Ben Ayed

Clinical and biomedical research in low-resource settings often faces significant challenges due to the need for high-quality data with sufficient sample sizes to construct effective models. These constraints hinder robust model training…

Remote medical diagnosis has emerged as a critical and indispensable technique in practical medical systems, where medical data are required to be efficiently compressed and transmitted for diagnosis by either professional doctors or…

Image and Video Processing · Electrical Eng. & Systems 2023-10-23 Guangqi Xie , Xin Li , Xiaohan Pan , Zhibo Chen

Information retrieval (IR) is essential in biomedical knowledge acquisition and clinical decision support. While recent progress has shown that language model encoders perform better semantic retrieval, training such models requires…

Information Retrieval · Computer Science 2024-01-17 Qiao Jin , Won Kim , Qingyu Chen , Donald C. Comeau , Lana Yeganova , W. John Wilbur , Zhiyong Lu

Although having achieved great success in medical image segmentation, deep learning-based approaches usually require large amounts of well-annotated data, which can be extremely expensive in the field of medical image analysis. Unlabeled…

Computer Vision and Pattern Recognition · Computer Science 2020-07-01 Yingda Xia , Dong Yang , Zhiding Yu , Fengze Liu , Jinzheng Cai , Lequan Yu , Zhuotun Zhu , Daguang Xu , Alan Yuille , Holger Roth

Methods to detect malignant lesions from screening mammograms are usually trained with fully annotated datasets, where images are labelled with the localisation and classification of cancerous lesions. However, real-world screening…

Computer Vision and Pattern Recognition · Computer Science 2024-04-03 Yuanhong Chen , Yuyuan Liu , Chong Wang , Michael Elliott , Chun Fung Kwok , Carlos Pena-Solorzano , Yu Tian , Fengbei Liu , Helen Frazer , Davis J. McCarthy , Gustavo Carneiro

Learning heterogeneous treatment effects (HTEs) is an important problem across many fields. Most existing methods consider the setting with a single treatment arm and a single outcome metric. However, in many real world domains, experiments…

Machine Learning · Computer Science 2022-06-13 Leon Yao , Caroline Lo , Israel Nir , Sarah Tan , Ariel Evnine , Adam Lerer , Alex Peysakhovich

It is difficult to accurately label ambiguous and complex shaped targets manually by binary masks. The weakness of binary mask under-expression is highlighted in medical image segmentation, where blurring is prevalent. In the case of…

Computer Vision and Pattern Recognition · Computer Science 2022-01-04 Lin Wang , Lie Ju , Xin Wang , Wanji He , Donghao Zhang , Yelin Huang , Zhiwen Yang , Xuan Yao , Xin Zhao , Xiufen Ye , Zongyuan Ge

The medical imaging community generates a wealth of datasets, many of which are openly accessible and annotated for specific diseases and tasks such as multi-organ or lesion segmentation. Current practices continue to limit model training…

Image and Video Processing · Electrical Eng. & Systems 2024-01-09 Constantin Ulrich , Fabian Isensee , Tassilo Wald , Maximilian Zenk , Michael Baumgartner , Klaus H. Maier-Hein

Deep learning models have become the mainstream method for medical image segmentation, but they require a large manually labeled dataset for training and are difficult to extend to unseen categories. Few-shot segmentation(FSS) has the…

Image and Video Processing · Electrical Eng. & Systems 2023-07-27 Yao Huang , Jianming Liu

Long-tailed learning is considered to be an extremely challenging problem in data imbalance learning. It aims to train well-generalized models from a large number of images that follow a long-tailed class distribution. In the medical field,…

Image and Video Processing · Electrical Eng. & Systems 2024-10-04 Lie Ju , Siyuan Yan , Yukun Zhou , Yang Nan , Xiaodan Xing , Peibo Duan , Zongyuan Ge

Multi-label text classification (MLTC) tasks in the medical domain often face the long-tail label distribution problem. Prior works have explored hierarchical label structures to find relevant information for few-shot classes, but mostly…

Computation and Language · Computer Science 2024-06-21 Xueren Ge , Satpathy Abhishek , Ronald Dean Williams , John A. Stankovic , Homa Alemzadeh

Human visual attention has recently shown its distinct capability in boosting machine learning models. However, studies that aim to facilitate medical tasks with human visual attention are still scarce. To support the use of visual…

Image and Video Processing · Electrical Eng. & Systems 2022-02-16 Hongzhi Zhu , Robert Rohling , Septimiu Salcudean

Segmentation of Multiple Sclerosis (MS) lesions in longitudinal brain MR scans is performed for monitoring the progression of MS lesions. We hypothesize that the spatio-temporal cues in longitudinal data can aid the segmentation algorithm.…

Image and Video Processing · Electrical Eng. & Systems 2020-09-29 Stefan Denner , Ashkan Khakzar , Moiz Sajid , Mahdi Saleh , Ziga Spiclin , Seong Tae Kim , Nassir Navab

Precise delineation of multiple organs or abnormal regions in the human body from medical images plays an essential role in computer-aided diagnosis, surgical simulation, image-guided interventions, and especially in radiotherapy treatment…

Image and Video Processing · Electrical Eng. & Systems 2024-11-19 Shiman Li , Haoran Wang , Yucong Meng , Chenxi Zhang , Zhijian Song

The ubiquitous availability of smartphones and smartwatches with integrated inertial measurement units (IMUs) enables straightforward capturing of human activities. For specific applications of sensor based human activity recognition (HAR),…

Computer Vision and Pattern Recognition · Computer Science 2023-10-24 Megha Thukral , Harish Haresamudram , Thomas Ploetz

Multi-label text classification (MLTC) is the task of assigning multiple labels to a given text, and has a wide range of application domains. Most existing approaches require an enormous amount of annotated data to learn a classifier and/or…

Computation and Language · Computer Science 2023-09-26 Muberra Ozmen , Joseph Cotnareanu , Mark Coates

Named Entity Recognition (NER) in the rare disease domain poses unique challenges due to limited labeled data, semantic ambiguity between entity types, and long-tail distributions. In this study, we evaluate the capabilities of GPT-4o for…

Computation and Language · Computer Science 2025-12-30 Nan Miles Xi , Yu Deng , Lin Wang

Accurate diagnostic coding of medical notes is crucial for enhancing patient care, medical research, and error-free billing in healthcare organizations. Manual coding is a time-consuming task for providers, and diagnostic codes often…

Machine Learning · Computer Science 2024-12-17 Prajwal Kailas , Max Homilius , Rahul C. Deo , Calum A. MacRae

In medical image analysis, the cost of acquiring high-quality data and their annotation by experts is a barrier in many medical applications. Most of the techniques used are based on supervised learning framework and need a large amount of…

Computer Vision and Pattern Recognition · Computer Science 2022-10-20 Siladittya Manna , Saumik Bhattacharya , Umapada Pal