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Hex-trees are identified as a particular instance of weighted unary-binary trees. The Horton-Strahler numbers of these objects are revisited, and, thanks to a substitution that is not immediately intuitive, explicit results are possible.…
We study compact straight-line embeddings of trees. We show that perfect binary trees can be embedded optimally: a tree with $n$ nodes can be drawn on a $\sqrt n$ by $\sqrt n$ grid. We also show that testing whether a given binary tree has…
The entities in directed networks arising from real-world interactions are often naturally organized under some hierarchical structure. Given a directed, weighted, graph with edges and node labels, we introduce ranking problem where the…
In this work, we explore proof theoretical connections between sequent, nested and labelled calculi. In particular, we show a general algorithm for transforming a class of nested systems into sequent calculus systems, passing through linear…
We obtain a generating function for the degree sequences and colors of rooted multipartite labeled series-reduced trees. As an application of this result, we determine the number of symbolic ultrametrics (introduced by B\"ocker and Dress)…
We introduce bijections between families of rooted maps with unfixed genus and families of so-called blossoming trees endowed with an arbitrary forward matching of their leaves. We first focus on Eulerian maps with controlled vertex…
The problem of comparing trees representing the evolutionary histories of cancerous tumors has turned out to be crucial, since there is a variety of different methods which typically infer multiple possible trees. A departure from the…
Sorting is a foundational problem in computer science that is typically employed on sequences or total orders. More recently, a more general form of sorting on partially ordered sets (or posets), where some pairs of elements are…
We examine the lattice of all order congruences of a finite poset from the viewpoint of combinatorial algebraic topology. We will prove that the order complex of the lattice of all nontrivial order congruences (or order-preserving…
We study the subgraph of the Young-Fibonacci graph induced by elements with odd $f$-statistic (the $f$-statistic of an element $w$ of a differential graded poset is the number of saturated chains from the minimal element of the poset to…
Determining the trajectories of cells and their lineages or ancestries in live-cell experiments are fundamental to the understanding of how cells behave and divide. This paper proposes novel online algorithms for jointly tracking and…
We study random typical minimal factorizations of the $n$-cycle into transpositions, which are factorizations of $(1, \ldots,n)$ as a product of $n-1$ transpositions. By viewing transpositions as chords of the unit disk and by reading them…
In this paper, we give a simple combinatorial explanation of a formula of A. Postnikov relating bicolored rooted trees to bicolored binary trees. We also present generalized formulas for the number of labeled k-ary trees, rooted labeled…
Multi-label classification is a common challenge in various machine learning applications, where a single data instance can be associated with multiple classes simultaneously. The current paper proposes a novel tree-based method for…
We consider extremal problems related to decks and multidecks of rooted binary trees (a.k.a. rooted phylogenetic tree shapes). Here, the deck (resp. multideck) of a tree $T$ refers to the set (resp. multiset) of leaf induced binary subtrees…
We consider labelings of a finite regular tree by a finite alphabet subject to restrictions specified by a nonnegative transition matrix, propose an algorithm for determining whether the set of possible configurations on the last row of the…
In this paper we prove a combinatorial theorem for finite labellings of trees, and show that it is equivalent to a theorem for finite covers of metric trees and a fixed point theorem on metric trees. We trace how these connections mimic the…
By rewriting the famous hook-content formula it easily follows that there are $\prod\limits_{1 \le i < j \le n} \frac{k_j - k_i + j -i}{j-i}$ semistandard tableaux of shape $(k_n,k_{n-1},...,k_1)$ with entries in $\{1,2,...,n\}$ or,…
Considering that the physical design of printed circuit board (PCB) follows the principle of modularized design, this paper proposes an automatic placement algorithm for functional modules. We first model the placement problem as a…
We revisit the model of the ballistic deposition studied in \cite{bdeposition} and prove several combinatorial properties of the random tree structure formed by the underlying stochastic process. Our results include limit theorems for the…