Related papers: Strict Half-Singleton Bound, Strict Direct Upper B…
The hull of a linear code $C$ is the intersection of $C$ with its dual. To the best of our knowledge, there are very few constructions of binary linear codes with the hull dimension $\ge 2$ except for self-orthogonal codes. We propose a…
In this work, we derive upper bounds on the cardinality of tandem duplication and palindromic deletion correcting codes by deriving the generalized sphere packing bound for these error types. We first prove that an upper bound for tandem…
The edit distance under the DCJ model can be computed in linear time for genomes with equal content or with Indels. But it becomes NP-Hard in the presence of duplications, a problem largely unsolved especially when Indels are considered. In…
The hull of a linear code is defined as the intersection of the code and its dual. This concept was initially introduced to classify finite projective planes. The hull plays a crucial role in determining the complexity of algorithms used to…
Based on the theoretical neuroscience, G. Cotardo and A. Ravagnavi in \cite{CR} introduced a kind of asymmetric binary codes called combinatorial neural codes (CN codes for short), with a "matched metric" $\delta_{r}$ called asymmetric…
This paper introduces a new solution to DNA storage that integrates all three steps of retrieval, namely clustering, reconstruction, and error correction. DNA-correcting codes are presented as a unique solution to the problem of ensuring…
Function-correcting codes (FCCs) protect specific function evaluations of a message against errors. This condition imposes a less stringent distance requirement than classical error-correcting codes (ECCs), allowing for reduced redundancy.…
The error coefficient of a linear code is defined as the number of minimum-weight codewords. In an additive white Gaussian noise channel, optimal linear codes with the smallest error coefficients achieve the best possible asymptotic frame…
We study low-delay error correction codes for streaming recovery over a class of packet-erasure channels that introduce both burst-erasures and isolated erasures. We propose a simple, yet effective class of codes whose parameters can be…
In this paper, linear index codes with multiple senders are studied, where every receiver receives encoded messages from all senders. A new fitting matrix for the multiple senders is proposed and it is proved that the minimum rank of the…
We obtain a characterization on self-orthogonality for a given binary linear code in terms of the number of column vectors in its generator matrix, which extends the result of Bouyukliev et al. (2006). As an application, we give an…
Finding deletion-correcting codes of maximum size has been an open problem for over 70 years, even for a single deletion. In this paper, we propose a novel approach for constructing deletion-correcting codes. A code is a set of sequences…
Assuming iterative decoding for binary erasure channels (BECs), a novel tree-based technique for upper bounding the bit error rates (BERs) of arbitrary, finite low-density parity-check (LDPC) codes is provided and the resulting bound can be…
An error-erasure channel is a simple noise model that introduces both errors and erasures. While the two types of errors can be corrected simultaneously with error-correcting codes, it is also known that any linear code allows for first…
The coverage depth problem in DNA data storage is about computing the expected number of reads needed to recover all encoded strands. Given a generator matrix of a linear code, this quantity equals the expected number of randomly drawn…
Maximum distance separable convolutional codes are characterized by the property that the free distance reaches the generalized Singleton bound, which makes them optimal for error correction. However, the existing constructions of such…
Function-correcting codes with data protection simultaneously protect both the data and a function of the data at distinct error-correction levels. When the function receives strictly stronger protection than the data, such a code is called…
Algebraic methods for the design of series of maximum distance separable (MDS) linear block and convolutional codes to required specifications and types are presented. Algorithms are given to design codes to required rate and required…
Minimal codes are linear codes where all non-zero codewords are minimal, i.e., whose support is not properly contained in the support of another codeword. The minimum possible length of such a $k$-dimensional linear code over $\mathbb{F}_q$…
We give a complete answer to the following basic question: "What is the maximal fraction of deletions or insertions tolerable by $q$-ary list-decodable codes with non-vanishing information rate?" This question has been open even for binary…