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Functional MRI (fMRI) is a powerful technique that has allowed us to characterize visual cortex responses to stimuli, yet such experiments are by nature constructed based on a priori hypotheses, limited to the set of images presented to the…

Neurons and Cognition · Quantitative Biology 2021-05-18 Zijin Gu , Keith W. Jamison , Meenakshi Khosla , Emily J. Allen , Yihan Wu , Thomas Naselaris , Kendrick Kay , Mert R. Sabuncu , Amy Kuceyeski

Deep learning is leading to major advances in the realm of brain decoding from functional Magnetic Resonance Imaging (fMRI). However, the large inter-subject variability in brain characteristics has limited most studies to train models on…

Machine Learning · Computer Science 2023-12-12 Alexis Thual , Yohann Benchetrit , Felix Geilert , Jérémy Rapin , Iurii Makarov , Hubert Banville , Jean-Rémi King

Reconstructing high-quality magnetic resonance images (MRI) from undersampled raw data is of great interest from both technical and clinical point of views. To this date, however, it is still a mathematically and computationally challenging…

Numerical Analysis · Mathematics 2021-09-01 T. Schmoderer , A. I Aviles-Rivero , V. Corona , N. Debroux , C-B. Schönlieb

Although image restoration has advanced significantly, most existing methods target only a single type of degradation. In real-world scenarios, images often contain multiple degradations simultaneously, such as rain, noise, and haze,…

Computer Vision and Pattern Recognition · Computer Science 2025-11-14 Hu Gao , Xiaoning Lei , Xichen Xu , Depeng Dang , Lizhuang Ma

While invaluable for many computer vision applications, decomposing a natural image into intrinsic reflectance and shading layers represents a challenging, underdetermined inverse problem. As opposed to strict reliance on conventional…

Computer Vision and Pattern Recognition · Computer Science 2018-09-03 Qingnan Fan , Jiaolong Yang , Gang Hua , Baoquan Chen , David Wipf

Using single-task deep learning methods to reconstruct Magnetic Resonance Imaging (MRI) data acquired with different imaging sequences is inherently challenging. The trained deep learning model typically lacks generalizability, and the…

Image and Video Processing · Electrical Eng. & Systems 2024-04-23 Wanyu Bian , Albert Jang , Fang Liu

Despite the rapid advances in Brain-computer Interfacing (BCI) and continuous effort to improve the accuracy of brain decoding systems, the urge for the systems to reconstruct the experiences of the users has been widely acknowledged. This…

Signal Processing · Electrical Eng. & Systems 2017-11-20 Pouya Ghaemmaghami

Accelerated MRI reconstructs images of clinical anatomies from sparsely sampled signal data to reduce patient scan times. While recent works have leveraged deep learning to accomplish this task, such approaches have often only been explored…

Image and Video Processing · Electrical Eng. & Systems 2022-12-01 Michael S. Yao , Michael S. Hansen

For lossy image compression systems, we develop an algorithm, iterative refinement, to improve the decoder's reconstruction compared to standard decoding techniques. Specifically, we propose a recurrent neural network approach for…

Computer Vision and Pattern Recognition · Computer Science 2018-11-13 Alexander G. Ororbia , Ankur Mali , Jian Wu , Scott O'Connell , David Miller , C. Lee Giles

In this work, we explore the decoding of mental imagery from subjects using their fMRI measurements. In order to achieve this decoding, we first created a mapping between a subject's fMRI signals elicited by the videos the subjects watched.…

Image and Video Processing · Electrical Eng. & Systems 2024-10-02 Arman Afrasiyabi , Erica Busch , Rahul Singh , Dhananjay Bhaskar , Laurent Caplette , Nicholas Turk-Browne , Smita Krishnaswamy

Due to image blurring image deconvolution is often used for studying biological structures in fluorescence microscopy. Fluorescence microscopy image volumes inherently suffer from intensity inhomogeneity, blur, and are corrupted by various…

Computer Vision and Pattern Recognition · Computer Science 2019-07-15 Soonam Lee , Shuo Han , Paul Salama , Kenneth W. Dunn , Edward J. Delp

For lossy image compression, we develop a neural-based system which learns a nonlinear estimator for decoding from quantized representations. The system links two recurrent networks that \help" each other reconstruct same target image…

Computer Vision and Pattern Recognition · Computer Science 2019-11-21 Ankur Mali , Alexander G. Ororbia , Clyde Lee Giles

Filtering real-world color images is challenging due to the complexity of noise that can not be formulated as a certain distribution. However, the rapid development of camera lens pos- es greater demands on image denoising in terms of both…

Computer Vision and Pattern Recognition · Computer Science 2018-09-11 Zhaoming Kong , Xiaowei Yang

Purpose: To allow fast and high-quality reconstruction of clinical accelerated multi-coil MR data by learning a variational network that combines the mathematical structure of variational models with deep learning. Theory and Methods:…

Computer Vision and Pattern Recognition · Computer Science 2017-04-04 Kerstin Hammernik , Teresa Klatzer , Erich Kobler , Michael P Recht , Daniel K Sodickson , Thomas Pock , Florian Knoll

To reduce scanning time and/or improve spatial/temporal resolution in some MRI applications, parallel MRI (pMRI) acquisition techniques with multiple coils acquisition have emerged since the early 1990s as powerful 3D imaging methods that…

Optimization and Control · Mathematics 2009-09-03 Lotfi Chaari , Jean-Christophe Pesquet , Philippe Ciuciu , Amel Benazza-Benyahia

Automated sample preparation and electron microscopy enables acquisition of very large image data sets. These technical advances are of special importance to the field of neuroanatomy, as 3D reconstructions of neuronal processes at the nm…

EEG based brain state decoding has numerous applications. State of the art decoding is based on processing of the multivariate sensor space signal, however evidence is mounting that EEG source reconstruction can assist decoding. EEG source…

Neurons and Cognition · Quantitative Biology 2017-04-20 Rasmus S. Andersen , Anders U. Eliasen , Nicolai Pedersen , Michael Riis Andersen , Sofie Therese Hansen , Lars Kai Hansen

Referring image segmentation aims to segment the target object referred by a natural language expression. However, previous methods rely on the strong assumption that one sentence must describe one target in the image, which is often not…

Computer Vision and Pattern Recognition · Computer Science 2023-08-29 Yutao Hu , Qixiong Wang , Wenqi Shao , Enze Xie , Zhenguo Li , Jungong Han , Ping Luo

Infrared image helps improve the perception capabilities of autonomous driving in complex weather conditions such as fog, rain, and low light. However, infrared image often suffers from low contrast, especially in non-heat-emitting targets…

Computer Vision and Pattern Recognition · Computer Science 2025-07-01 Siyuan Chai , Xiaodong Guo , Tong Liu

Deep neural networks (DNNs) trained on visual tasks develop feature representations that resemble those in the human visual system. Although DNN-based encoding models can accurately predict brain responses to visual stimuli, they offer…

Computer Vision and Pattern Recognition · Computer Science 2025-06-06 Matthew W. Shinkle , Mark D. Lescroart