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TDA (topological data analysis) is a relatively new area of research related to importing classical ideas from topology into the realm of data analysis. Under the umbrella term TDA, there falls, in particular, the notion of persistent…

Algebraic Topology · Mathematics 2019-06-03 Facundo Memoli , Kritika Singhal

0-dimensional persistent homology is known, from a computational point of view, as the easy case. Indeed, given a list of $n$ edges in non-decreasing order of filtration value, one only needs a union-find data structure to keep track of the…

Computational Geometry · Computer Science 2023-12-12 Marc Glisse

We define a simple, explicit map sending a morphism $f:M \rightarrow N$ of pointwise finite dimensional persistence modules to a matching between the barcodes of $M$ and $N$. Our main result is that, in a precise sense, the quality of this…

Algebraic Topology · Mathematics 2016-10-25 Ulrich Bauer , Michael Lesnick

Mathematical morphology (MM) is a powerful and widely used framework in image processing. Through set-theoretic and discrete geometric principles, MM operations such as erosion, dilation, opening, and closing effectively manipulate digital…

Software Engineering · Computer Science 2026-02-18 Chuan-Shen Hu

Magnitude homology is an emerging framework that captures the intrinsic topological and geometric features of metric spaces, demonstrating significant potential for topoplogical data analysis and geometric data analysis. This work…

Algebraic Topology · Mathematics 2026-01-08 Wanying Bi , Hongsong Feng , Jingyan Li , Jie Wu

For nearly three decades, spatial games have produced a wealth of insights to the study of behavior and its relation to population structure. However, as different rules and factors are added or altered, the dynamics of spatial models often…

Computer Science and Game Theory · Computer Science 2021-09-30 Jakob Stenseke

Persistent homology is a topological data analysis tool that has been widely generalized, extending its scope beyond the field of topology. Among its extensions, steady and ranging persistence were developed to study a wide variety of graph…

Algebraic Topology · Mathematics 2026-05-15 Yann-Situ Gazull

In this paper, we introduce the persistence transformation, a novel methodology in Topological Data Analysis (TDA) for applications in time series data which can be obtained in various areas such as science, politics, economy, healthcare,…

Algebraic Topology · Mathematics 2024-01-31 Gideon Klaila , Anastasios Stefanou , Lena Ranke

We develop the notion of a "filtered cospan" as an algebraic object that stands in the same relation to interlevel persistence modules as filtered chain complexes stand with respect to sublevel persistence modules. This relation is…

Algebraic Topology · Mathematics 2026-01-01 Michael Usher

In this paper we present a new approach to computing homology (with field coefficients) and persistent homology. We use concepts from discrete Morse theory, to provide an algorithm which can be expressed solely in terms of simple graph…

Algebraic Topology · Mathematics 2012-10-26 Paweł Dłotko , Hubert Wagner

We study sublevel set and superlevel set persistent homology on discrete functions through the perspective of finite ordered sets of both linearly ordered and cyclically ordered domains. Finite ordered sets also serve as the codomain of our…

Algebraic Topology · Mathematics 2025-08-27 Robin Belton , Georg Essl

Proteins are the most important biomolecules for living organisms. The understanding of protein structure, function, dynamics and transport is one of most challenging tasks in biological science. In the present work, persistent homology is,…

Biomolecules · Quantitative Biology 2014-12-10 Kelin Xia , Guo-Wei Wei

Persistent homology enables fast and computable comparison of topological objects. However, it is naturally limited to the analysis of topological spaces. We extend the theory of persistence, by guaranteeing robustness and computability to…

Combinatorics · Mathematics 2020-09-16 Mattia G. Bergomi , Massimo Ferri , Pietro Vertechi , Lorenzo Zuffi

Persistent homology (PH) has been widely applied to graph data to extract topological features. However, little attention has been paid to how different distance functions on a graph affect the resulting persistence barcodes and their…

Algebraic Topology · Mathematics 2026-02-17 Eunwoo Heo , Byeongchan Choi , Jae-Hun Jung

Morse decompositions partition the flows in a vector field into equivalent structures. Given such a decomposition, one can define a further summary of its flow structure by what is called a connection matrix.These matrices, a generalization…

Dynamical Systems · Mathematics 2025-07-31 Tamal K. Dey , Michał Lipiński , Andrew Haas

We introduce a refinement of persistent homology that detects simple-homotopy-theoretic phenomena invisible to homology. Given a filtered simplicial complex, we define the Morse complexity profile as the minimal number of critical simplices…

Algebraic Topology · Mathematics 2026-04-14 Divya Ahuja , Jaya NN Iyer

Persistence homology is a tool used to measure topological features that are present in data sets and functions. Persistence pairs births and deaths of these features as we iterate through the sublevel sets of the data or function of…

Computational Geometry · Computer Science 2010-02-10 Brittany Terese Fasy

Persistent homology, a central tool of topological data analysis, provides invariants of data called barcodes (also known as persistence diagrams). A barcode is simply a multiset of real intervals. Recent work of Edelsbrunner, Jablonski,…

Algebraic Topology · Mathematics 2020-10-12 Ulrich Bauer , Michael Lesnick

Persistent homology is a popular tool in Topological Data Analysis. It provides numerical characteristics of data sets which reflect global geometric properties. In order to be useful in practice, for example for feature generation in…

Computational Geometry · Computer Science 2020-02-17 Boris Goldfarb

The Euler characteristic is an invariant of a topological space that in a precise sense captures its canonical notion of size, akin to the cardinality of a set. The Euler characteristic is closely related to the homology of a space, as it…

Algebraic Topology · Mathematics 2022-06-22 Nina Otter