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Collective cell motility is crucial to many biological processes including morphogenesis, wound healing, and cancer invasion. Recently, the biology and biophysics communities have begun to use the term cell jamming to describe the…

Biological Physics · Physics 2021-02-23 Elizabeth Lawson-Keister , M. Lisa Manning

Large-scale distributed antenna systems with many access points (APs) that serve the users by coherent joint transmission is being considered for 5G-and-beyond networks. The technology is called Cell-free Massive MIMO and can provide a more…

Information Theory · Computer Science 2020-06-30 Trinh Van Chien , Emil Björnson , Erik G. Larsson

Accumulation at boundaries represents a widely observed phenomenon in active systems with implications for microbial ecology and engineering applications. To rationalize the underlying physics, we provide analytical predictions for the…

Statistical Mechanics · Physics 2026-03-13 Yanis Baouche , Mathis Guéneau , Christina Kurzthaler

Intercellular signaling has an important role in organism development, but not all communication occurs using the same mechanism. Here, we analyze the energy efficiency of intercellular signaling by two canonical mechanisms: diffusion of…

Quantitative Methods · Quantitative Biology 2022-11-30 Hyunjoong Kim , Yoichiro Mori , Joshua B. Plotkin

Receptor cells with electrically coupled axons can improve both their input sensitivity and dynamical range due to collective non-linear wave properties. This mechanism is illustrated by a network of axons modeled by excitable maps…

Disordered Systems and Neural Networks · Physics 2007-05-23 Osame Kinouchi

Transport of colloid particles through narrow channels is ubiquitous in cell biology as well as becoming increasingly important for microfluidic applications or targeted drug delivery. Membrane channels in cells are useful models for…

Soft Condensed Matter · Physics 2017-06-26 S. D. Goldt , E. M. Terentjev

Directed information transmission is paramount for many social, physical, and biological systems. For neural systems, scientists have studied this problem under the paradigm of feedforward networks for decades. In most models of feedforward…

Neurons and Cognition · Quantitative Biology 2017-11-21 Yazan N. Billeh , Michael T. Schaub

Individuals are always limited by some inelastic resources, such as time and energy, which restrict them to dedicate to social interaction and limit their contact capacity. Contact capacity plays an important role in dynamics of social…

Physics and Society · Physics 2015-12-25 Wei Wang , Panpan Shu , Yu-Xiao Zhu , Ming Tang , Yi-Cheng Zhang

Phase-amplitude coupling (PAC) describes the phenomenon where the power of a high-frequency oscillation evolves with the phase of a low-frequency one. We propose a model that explains the emergence of PAC in two commonly-accepted…

Neurons and Cognition · Quantitative Biology 2021-06-30 Yuzhen Qin , Tommaso Menara , Danielle S. Bassett , Fabio Pasqualetti

Inspired by recent experimental observation of patterning at the membrane of a living cell, we propose a generic model for the dynamics of a fluctuating interface driven by particle-like inclusions which stimulate its growth. We find that…

Soft Condensed Matter · Physics 2019-07-25 F. Cagnetta , M. R. Evans , D. Marenduzzo

We show the principal ability of bypassing damaged demyelinated portions of nervous tissue, thereby restoring its normal function for the passage of action potentials. We carry out a theoretical analysis on the basis of the synchronization…

Biological Physics · Physics 2016-11-07 M. N. Shneider , M. Pekker

Action potential generation underlies some of the most consequential dynamical systems on Earth, from brains to hearts. It is therefore interesting to develop synthetic cell-free systems, based on the same molecular mechanisms, which may…

Biological Physics · Physics 2024-03-07 Ziqi Pi , Giovanni Zocchi

In the past decade, the cell-type specific connectivity and activity of local cortical networks have been characterized experimentally to some detail. In parallel, modeling has been established as a tool to relate network structure to…

Neurons and Cognition · Quantitative Biology 2011-06-29 Tobias C. Potjans , Markus Diesmann

The spatiotemporal organisation of proteins and lipids on the cell surface has direct functional consequences for signaling, sorting and endocytosis. Earlier studies have shown that multiple types of membrane proteins including…

Soft Condensed Matter · Physics 2022-09-14 Suvrajit Saha , Amit Das , Chandrima Patra , Anupama Ambika Anilkumar , Parijat Sil , Satyajit Mayor , Madan Rao

Electrical signaling in the brain plays a vital role to our existence but at the same time, the fundamental mechanism of this propagation is undeciphered. Notable advancements have been made in the numerical modeling supplementing the…

Neurons and Cognition · Quantitative Biology 2024-11-11 Rahul Gulati , Shiva Rudraraju

We typically think of cells as responding to external signals independently by regulating their gene expression levels, yet they often locally exchange information and coordinate. Can such spatial coupling be of benefit for conveying…

Molecular Networks · Quantitative Biology 2015-01-19 Thomas R. Sokolowski , Gašper Tkačik

We consider quantum many body systems as quantum channels and study the relation between the transfer quality and the size of the spectral gap between the system's ground and excited states. In our setup two ancillas are weakly coupled to…

Quantum Physics · Physics 2009-11-11 Michael J. Hartmann , Moritz E. Reuter , Martin B. Plenio

The affinity of antibodies (Abs) produced in vivo for their target antigens (Ags) is typically well below the maximum affinity possible. Nearly 25 years ago, Foote and Eisen explained how an 'affinity ceiling' could arise from constraints…

Populations and Evolution · Quantitative Biology 2021-02-16 Rajat Desikan , Rustom Antia , Narendra M. Dixit

Actin is a globular protein which forms long polar filaments in the eukaryotic cytoskeleton. Actin networks play a key role in cell mechanics and cell motility. They have also been implicated in information transmission and processing,…

Emerging Technologies · Computer Science 2015-07-01 Stefano Siccardi , Jack A. Tuszynski , Andrew Adamatzky

Active cellular transport is a fundamental mechanism for protein and vesicle delivery, cell cycle and molecular degradation. Viruses can hijack the transport system and use it to reach the nucleus. Most transport processes consist of…

Quantitative Methods · Quantitative Biology 2009-11-13 T. Lagache , D. Holcman
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