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Recordings of whole brain activity with single neuron resolution are now feasible in simple organisms. Yet, it is still challenging to appropriately simplify such complex, noisy, and multivariate data in order to reveal general principles…

Neurons and Cognition · Quantitative Biology 2017-11-27 Connor Brennan , Alex Proekt

It is believed that neural information representation and processing relies on the neural population instead of a single neuron. In neuromorphic photonics, photonic neurons in the form of nonlinear responses have been extensively studied in…

Emerging Technologies · Computer Science 2021-09-28 Bowen Ma , Junfeng Zhang , Weiwen Zou

Neuromorphic computing has emerged as a promising avenue towards building the next generation of intelligent computing systems. It has been proposed that memristive devices, which exhibit history-dependent conductivity modulation, could…

Investigations of natural variation among cells within a population are essential for understanding the stochastic nature of tissue cell deformation under applied load. In the existing literature, the population variation of single-cell…

Cell Behavior · Quantitative Biology 2011-07-14 John M. Maloney , Krystyn J. Van Vliet

Place cells in the hippocampus are active when an animal visits a certain location (referred to as a place field) within an environment. Grid cells in the medial entorhinal cortex (MEC) respond at multiple locations, with firing fields that…

Neurons and Cognition · Quantitative Biology 2018-05-17 David M. Schwartz , O. Ozan Koyluoglu

High-dimensional neural activity often reside in a low-dimensional subspace, referred to as neural manifolds. Grid cells in the medial entorhinal cortex provide a periodic spatial code that are organized near a toroidal manifold,…

Neurons and Cognition · Quantitative Biology 2025-10-22 Yuxing Jared Yao , Iris H. R. Yoon

Recent cellular-level volumetric brain reconstructions have revealed high levels of anatomic complexity. Determining which structural aspects of the brain to focus on, especially when comparing with computational models and other organisms,…

Disordered Systems and Neural Networks · Physics 2023-09-29 Helen S. Ansell , István A. Kovács

In this article, we review a class of neuro-mimetic computational models that we place under the label of spiking predictive coding. Specifically, we review the general framework of predictive processing in the context of neurons that emit…

Neurons and Cognition · Quantitative Biology 2024-09-10 Antony W. N'dri , William Gebhardt , Céline Teulière , Fleur Zeldenrust , Rajesh P. N. Rao , Jochen Triesch , Alexander Ororbia

To explain the differentiation of stem cells in terms of dynamical systems theory, models of interacting cells with intracellular protein expression dynamics are analyzed and simulated. Simulations were carried out for all possible protein…

Cell Behavior · Quantitative Biology 2015-06-15 Yusuke Goto , Kunihiko Kaneko

Living organisms rely on molecular networks, such as gene circuits and signaling pathways, for information processing and robust decision-making in crowded, noisy environments. Recent advances show that interacting biomolecules…

Recent developments in high throughput profiling of individual neurons have spurred data driven exploration of the idea that there exist natural groupings of neurons referred to as cell types. The promise of this idea is that the immense…

Neurons and Cognition · Quantitative Biology 2019-11-14 Rohan Gala , Nathan Gouwens , Zizhen Yao , Agata Budzillo , Osnat Penn , Bosiljka Tasic , Gabe Murphy , Hongkui Zeng , Uygar Sümbül

To learn how cognition is implemented in the brain, we must build computational models that can perform cognitive tasks, and test such models with brain and behavioral experiments. Cognitive science has developed computational models of…

Neurons and Cognition · Quantitative Biology 2018-08-01 Nikolaus Kriegeskorte , Pamela K. Douglas

We argue that embryological morphogenesis provides a model of how massive swarms of microscopic agents can be coordinated to assemble complex, multiscale hierarchical structures. This is accomplished by understanding natural morphogenetic…

Multiagent Systems · Computer Science 2019-08-26 Bruce J. MacLennan , Allen C. McBride

We investigate theoretically tunable non-Hermitian skin effect in systems with gain and loss, and find that bipolar (quadripolar) non-Hermitian skin effect characterized by topological invariants in one (two)-dimensional system. We also…

Applied Physics · Physics 2024-10-29 Wen-Cheng Jiang , Hong Wu , Jian Li , Qing-Xu Li , Jia-Ji Zhu

Neuromorphic computing systems emulate the electrophysiological behavior of the biological nervous system using mixed-mode analog or digital VLSI circuits. These systems show superior accuracy and power efficiency in carrying out cognitive…

Systems and Control · Electrical Eng. & Systems 2025-03-26 Aadhitiya VS , Jani Babu Shaik , Sonal Singhal , Siona Menezes Picardo , Nilesh Goel

Background: As available medical image datasets increase in size, it becomes infeasible for clinicians to review content manually for knowledge extraction. The objective of this study was to create an automated clustering resulting in…

Computer Vision and Pattern Recognition · Computer Science 2023-09-18 Lidia Talavera-Martinez , Philipp Tschandl

To make sense of their surroundings, intelligent systems must transform complex sensory inputs to structured codes that are reduced to task-relevant information such as object category. Biological agents achieve this in a largely autonomous…

Computer Vision and Pattern Recognition · Computer Science 2024-07-09 Robin Weiler , Matthias Brucklacher , Cyriel M. A. Pennartz , Sander M. Bohté

Photonic neuromorphic computing promises revolutionary advances in parallel and high-speed processing, yet a key challenge persists: co-integrating nonlinearity, dense connectivity, and intrinsic memory monolithically to enable…

The development of a large non-coding fraction in eukaryotic DNA and the phenomenon of the code-bloat in the field of evolutionary computations show a striking similarity. This seems to suggest that (in the presence of mechanisms of code…

Quantitative Methods · Quantitative Biology 2009-11-13 Giovanni Feverati , Fabio Musso

Effective representation of molecules is a crucial factor affecting the performance of artificial intelligence models. This study introduces a flexible, fragment-based, multiscale molecular representation framework called t-SMILES…

Machine Learning · Computer Science 2024-05-22 Juan-Ni Wu , Tong Wang , Yue Chen , Li-Juan Tang , Hai-Long Wu , Ru-Qin Yu