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Semantic segmentation of medical images with deep learning models is rapidly developed. In this study, we benchmarked state-of-the-art deep learning segmentation algorithms on our clinical stereotactic radiosurgery dataset, demonstrating…

Image and Video Processing · Electrical Eng. & Systems 2020-07-24 Siang-Ruei Wu , Hao-Yun Chang , Florence T Su , Heng-Chun Liao , Wanju Tseng , Chun-Chih Liao , Feipei Lai , Feng-Ming Hsu , Furen Xiao

Most modern neural machine translation (NMT) systems rely on presegmented inputs. Segmentation granularity importantly determines the input and output sequence lengths, hence the modeling depth, and source and target vocabularies, which in…

Computation and Language · Computer Science 2018-11-06 Julia Kreutzer , Artem Sokolov

Human in-the-loop quality assurance (QA) is typically performed after medical image segmentation to ensure that the systems are performing as intended, as well as identifying and excluding outliers. By performing QA on large-scale,…

Image and Video Processing · Electrical Eng. & Systems 2019-11-14 Ho Hin Lee , Yucheng Tang , Olivia Tang , Yuchen Xu , Yunqiang Chen , Dashan Gao , Shizhong Han , Riqiang Gao , Michael R. Savona , Richard G. Abramson , Yuankai Huo , Bennett A. Landman

Semantic segmentation is the task of classifying each pixel in an image. Training a segmentation model achieves best results using annotated images, where each pixel is annotated with the corresponding class. When obtaining fine annotations…

Computer Vision and Pattern Recognition · Computer Science 2025-10-20 Jort de Jong , Mike Holenderski

This paper discusses the deep learning architectures currently used for pixel-wise segmentation of primary and secondary glioblastomas and low-grade gliomas. We implement various models such as the popular UNet architecture and compare the…

Computer Vision and Pattern Recognition · Computer Science 2018-06-12 William Bakst , Linus Meyer-Teruel , Jasdeep Singh

Building an accurate computer-aided diagnosis system based on data-driven approaches requires a large amount of high-quality labeled data. In medical imaging analysis, multiple expert annotators often produce subjective estimates about…

Computer Vision and Pattern Recognition · Computer Science 2022-03-22 Khiem H. Le , Tuan V. Tran , Hieu H. Pham , Hieu T. Nguyen , Tung T. Le , Ha Q. Nguyen

Machine learning-based segmentation in medical imaging is widely used in clinical applications from diagnostics to radiotherapy treatment planning. Segmented medical images with ground truth are useful for investigating the properties of…

Image and Video Processing · Electrical Eng. & Systems 2023-01-02 Shuyue Guan , Ravi K. Samala , Weijie Chen

Quantitative analysis of brain tumors is critical for clinical decision making. While manual segmentation is tedious, time consuming and subjective, this task is at the same time very challenging to solve for automatic segmentation methods.…

Computer Vision and Pattern Recognition · Computer Science 2018-03-01 Fabian Isensee , Philipp Kickingereder , Wolfgang Wick , Martin Bendszus , Klaus H. Maier-Hein

Instance segmentation is a computer vision task where separate objects in an image are detected and segmented. State-of-the-art deep neural network models require large amounts of labeled data in order to perform well in this task. Making…

Computer Vision and Pattern Recognition · Computer Science 2022-02-21 Tuomas Sormunen , Arttu Lämsä , Miguel Bordallo Lopez

Stereotactic radiosurgery is a minimally-invasive treatment option for a large number of patients with intracranial tumors. As part of the therapy treatment, accurate delineation of brain tumors is of great importance. However,…

Semantic segmentation has been widely investigated in the community, in which the state of the art techniques are based on supervised models. Those models have reported unprecedented performance at the cost of requiring a large set of high…

Computer Vision and Pattern Recognition · Computer Science 2022-01-11 Rihuan Ke , Angelica Aviles-Rivero , Saurabh Pandey , Saikumar Reddy , Carola-Bibiane Schönlieb

Medical image analysis often faces significant challenges due to limited expert-annotated data, hindering both model generalization and clinical adoption. We propose an expert-guided explainable few-shot learning framework that integrates…

Image and Video Processing · Electrical Eng. & Systems 2025-09-12 Ifrat Ikhtear Uddin , Longwei Wang , KC Santosh

Carefully designed activation functions can improve the performance of neural networks in many machine learning tasks. However, it is difficult for humans to construct optimal activation functions, and current activation function search…

Machine Learning · Computer Science 2023-11-10 Garrett Bingham , Risto Miikkulainen

We systematically evaluate a Deep Learning (DL) method in a 3D medical image segmentation task. Our segmentation method is integrated into the radiosurgery treatment process and directly impacts the clinical workflow. With our method, we…

Image and Video Processing · Electrical Eng. & Systems 2021-08-24 Boris Shirokikh , Alexandra Dalechina , Alexey Shevtsov , Egor Krivov , Valery Kostjuchenko , Amayak Durgaryan , Mikhail Galkin , Andrey Golanov , Mikhail Belyaev

Noisy labels can significantly affect the performance of deep neural networks (DNNs). In medical image segmentation tasks, annotations are error-prone due to the high demand in annotation time and in the annotators' expertise. Existing…

Image and Video Processing · Electrical Eng. & Systems 2023-08-08 Jiachen Yao , Yikai Zhang , Songzhu Zheng , Mayank Goswami , Prateek Prasanna , Chao Chen

Machine learning algorithms underpin modern diagnostic-aiding software, which has proved valuable in clinical practice, particularly in radiology. However, inaccuracies, mainly due to the limited availability of clinical samples for…

This paper investigates the automation of qualitative data analysis, focusing on inductive coding using large language models (LLMs). Unlike traditional approaches that rely on deductive methods with predefined labels, this research…

Computation and Language · Computer Science 2025-12-02 Angelina Parfenova , Andreas Marfurt , Alexander Denzler , Juergen Pfeffer

High-quality data is necessary for modern machine learning. However, the acquisition of such data is difficult due to noisy and ambiguous annotations of humans. The aggregation of such annotations to determine the label of an image leads to…

Computer Vision and Pattern Recognition · Computer Science 2022-11-07 Lars Schmarje , Vasco Grossmann , Claudius Zelenka , Sabine Dippel , Rainer Kiko , Mariusz Oszust , Matti Pastell , Jenny Stracke , Anna Valros , Nina Volkmann , Reinhard Koch

Despite recent progress of automatic medical image segmentation techniques, fully automatic results usually fail to meet the clinical use and typically require further refinement. In this work, we propose a quality-aware memory network for…

Computer Vision and Pattern Recognition · Computer Science 2021-07-06 Tianfei Zhou , Liulei Li , Gustav Bredell , Jianwu Li , Ender Konukoglu

Prepared domain specific datasets plays an important role to supervised learning approaches. In this article a new sentence dataset for software quality-in-use is proposed. Three experts were chosen to annotate the data using a proposed…

Software Engineering · Computer Science 2015-09-21 Issa Atoum , Chih How Bong , Narayanan Kulathuramaiyer